Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ndc1Q8VCB1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ndc1Q8VCB1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.86■□□□□ 0.29
Ndc1Q8VCB1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ndc1Q8VCB1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ndc1Q8VCB1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ndc1Q8VCB1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.86■□□□□ 0.29
Ndc1Q8VCB1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ndc1Q8VCB1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ndc1Q8VCB1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ndc1Q8VCB1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ndc1Q8VCB1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ndc1Q8VCB1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ndc1Q8VCB1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Gm715-201ENSMUST00000117865 831 ntBASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ndc1Q8VCB1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ndc1Q8VCB1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ndc1Q8VCB1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ndc1Q8VCB1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ndc1Q8VCB1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.83■□□□□ 0.28
Ndc1Q8VCB1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.83■□□□□ 0.28
Ndc1Q8VCB1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.83■□□□□ 0.28
Ndc1Q8VCB1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ndc1Q8VCB1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.83■□□□□ 0.28
Ndc1Q8VCB1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ndc1Q8VCB1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ndc1Q8VCB1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.83■□□□□ 0.28
Ndc1Q8VCB1 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.83■□□□□ 0.28
Ndc1Q8VCB1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ndc1Q8VCB1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ndc1Q8VCB1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ndc1Q8VCB1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ndc1Q8VCB1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ndc1Q8VCB1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ndc1Q8VCB1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ndc1Q8VCB1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ndc1Q8VCB1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.82■□□□□ 0.28
Ndc1Q8VCB1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ndc1Q8VCB1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ndc1Q8VCB1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ndc1Q8VCB1 Mir1199-201ENSMUST00000117015 119 ntBASIC16.82■□□□□ 0.28
Ndc1Q8VCB1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.82■□□□□ 0.28
Ndc1Q8VCB1 Gm38285-201ENSMUST00000192928 922 ntBASIC16.82■□□□□ 0.28
Ndc1Q8VCB1 Grk6-206ENSMUST00000224995 2971 ntBASIC16.82■□□□□ 0.28
Ndc1Q8VCB1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.82■□□□□ 0.28
Ndc1Q8VCB1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ndc1Q8VCB1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ndc1Q8VCB1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ndc1Q8VCB1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.81■□□□□ 0.28
Ndc1Q8VCB1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndc1Q8VCB1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndc1Q8VCB1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndc1Q8VCB1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.81■□□□□ 0.28
Ndc1Q8VCB1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndc1Q8VCB1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ndc1Q8VCB1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ndc1Q8VCB1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.81■□□□□ 0.28
Ndc1Q8VCB1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms