Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Calcoco1Q8CGU1 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.64■□□□□ 0.57
Calcoco1Q8CGU1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Calcoco1Q8CGU1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Calcoco1Q8CGU1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Calcoco1Q8CGU1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Calcoco1Q8CGU1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Calcoco1Q8CGU1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Calcoco1Q8CGU1 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.63■□□□□ 0.57
Calcoco1Q8CGU1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Calcoco1Q8CGU1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Calcoco1Q8CGU1 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.63■□□□□ 0.57
Calcoco1Q8CGU1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.63■□□□□ 0.57
Calcoco1Q8CGU1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Calcoco1Q8CGU1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Calcoco1Q8CGU1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Calcoco1Q8CGU1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.63■□□□□ 0.57
Calcoco1Q8CGU1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Calcoco1Q8CGU1 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.63■□□□□ 0.57
Calcoco1Q8CGU1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Calcoco1Q8CGU1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Calcoco1Q8CGU1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Calcoco1Q8CGU1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Calcoco1Q8CGU1 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.62■□□□□ 0.57
Calcoco1Q8CGU1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Calcoco1Q8CGU1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Calcoco1Q8CGU1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.62■□□□□ 0.57
Calcoco1Q8CGU1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.62■□□□□ 0.57
Calcoco1Q8CGU1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.62■□□□□ 0.57
Calcoco1Q8CGU1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Calcoco1Q8CGU1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Calcoco1Q8CGU1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Calcoco1Q8CGU1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Calcoco1Q8CGU1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Calcoco1Q8CGU1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.62■□□□□ 0.57
Calcoco1Q8CGU1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Calcoco1Q8CGU1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.61■□□□□ 0.57
Calcoco1Q8CGU1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Calcoco1Q8CGU1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Calcoco1Q8CGU1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Calcoco1Q8CGU1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Calcoco1Q8CGU1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Calcoco1Q8CGU1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.61■□□□□ 0.57
Calcoco1Q8CGU1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Calcoco1Q8CGU1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Calcoco1Q8CGU1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Calcoco1Q8CGU1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Calcoco1Q8CGU1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Calcoco1Q8CGU1 Gm10849-201ENSMUST00000100397 618 ntBASIC18.61■□□□□ 0.57
Calcoco1Q8CGU1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Calcoco1Q8CGU1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Calcoco1Q8CGU1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.61■□□□□ 0.57
Calcoco1Q8CGU1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Calcoco1Q8CGU1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Calcoco1Q8CGU1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Calcoco1Q8CGU1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Calcoco1Q8CGU1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Calcoco1Q8CGU1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Calcoco1Q8CGU1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Calcoco1Q8CGU1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Calcoco1Q8CGU1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Calcoco1Q8CGU1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Calcoco1Q8CGU1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Calcoco1Q8CGU1 Gm13234-201ENSMUST00000120010 747 ntBASIC18.59■□□□□ 0.57
Calcoco1Q8CGU1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Calcoco1Q8CGU1 AV356131-201ENSMUST00000206201 750 ntBASIC18.59■□□□□ 0.57
Calcoco1Q8CGU1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Calcoco1Q8CGU1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Calcoco1Q8CGU1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Calcoco1Q8CGU1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Calcoco1Q8CGU1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Calcoco1Q8CGU1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Calcoco1Q8CGU1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.58■□□□□ 0.57
Calcoco1Q8CGU1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.58■□□□□ 0.56
Calcoco1Q8CGU1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Calcoco1Q8CGU1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.58■□□□□ 0.56
Calcoco1Q8CGU1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Calcoco1Q8CGU1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Calcoco1Q8CGU1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Calcoco1Q8CGU1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Calcoco1Q8CGU1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Calcoco1Q8CGU1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms