Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Pcdh8Q7TSK3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdh8Q7TSK3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh8Q7TSK3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdh8Q7TSK3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh8Q7TSK3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh8Q7TSK3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh8Q7TSK3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdh8Q7TSK3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdh8Q7TSK3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh8Q7TSK3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh8Q7TSK3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh8Q7TSK3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh8Q7TSK3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Pcdh8Q7TSK3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh8Q7TSK3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 Gm38285-201ENSMUST00000192928 922 ntBASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdh8Q7TSK3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh8Q7TSK3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh8Q7TSK3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdh8Q7TSK3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh8Q7TSK3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh8Q7TSK3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Pcdh8Q7TSK3 Gm37055-201ENSMUST00000191866 133 ntBASIC17.62■□□□□ 0.41
Pcdh8Q7TSK3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh8Q7TSK3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh8Q7TSK3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh8Q7TSK3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh8Q7TSK3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh8Q7TSK3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdh8Q7TSK3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh8Q7TSK3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdh8Q7TSK3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh8Q7TSK3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh8Q7TSK3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh8Q7TSK3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdh8Q7TSK3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.61■□□□□ 0.41
Pcdh8Q7TSK3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh8Q7TSK3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh8Q7TSK3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh8Q7TSK3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdh8Q7TSK3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh8Q7TSK3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh8Q7TSK3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh8Q7TSK3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh8Q7TSK3 Gm15375-201ENSMUST00000119510 849 ntBASIC17.6■□□□□ 0.41
Pcdh8Q7TSK3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdh8Q7TSK3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdh8Q7TSK3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdh8Q7TSK3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdh8Q7TSK3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdh8Q7TSK3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh8Q7TSK3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh8Q7TSK3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdh8Q7TSK3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh8Q7TSK3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Gm43183-201ENSMUST00000200632 547 ntBASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh8Q7TSK3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms