Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1bP61025 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1bP61025 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1bP61025 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1bP61025 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC12.75□□□□□ -0.37
Cks1bP61025 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Cks1bP61025 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cks1bP61025 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cks1bP61025 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cks1bP61025 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC12.75□□□□□ -0.37
Cks1bP61025 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1bP61025 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1bP61025 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1bP61025 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1bP61025 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1bP61025 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cks1bP61025 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cks1bP61025 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1bP61025 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1bP61025 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1bP61025 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1bP61025 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1bP61025 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1bP61025 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1bP61025 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1bP61025 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cks1bP61025 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC12.74□□□□□ -0.37
Cks1bP61025 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1bP61025 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1bP61025 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1bP61025 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1bP61025 Gm22238-201ENSMUST00000175222 88 ntBASIC12.74□□□□□ -0.37
Cks1bP61025 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1bP61025 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cks1bP61025 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1bP61025 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1bP61025 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1bP61025 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1bP61025 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1bP61025 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cks1bP61025 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1bP61025 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cks1bP61025 Rncr4-201ENSMUST00000194541 2234 ntBASIC12.73□□□□□ -0.37
Cks1bP61025 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1bP61025 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cks1bP61025 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1bP61025 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.73□□□□□ -0.37
Cks1bP61025 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cks1bP61025 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1bP61025 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.73□□□□□ -0.37
Cks1bP61025 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1bP61025 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1bP61025 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1bP61025 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1bP61025 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1bP61025 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1bP61025 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1bP61025 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cks1bP61025 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1bP61025 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1bP61025 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cks1bP61025 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cks1bP61025 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.72□□□□□ -0.37
Cks1bP61025 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cks1bP61025 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Cks1bP61025 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.72□□□□□ -0.37
Cks1bP61025 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC12.72□□□□□ -0.37
Cks1bP61025 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Gm42911-201ENSMUST00000199360 1630 ntBASIC12.72□□□□□ -0.37
Cks1bP61025 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.72□□□□□ -0.37
Cks1bP61025 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.72□□□□□ -0.37
Cks1bP61025 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1bP61025 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1bP61025 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1bP61025 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1bP61025 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1bP61025 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms