Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.15□□□□□ -0.14
Rab4aP56371 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab4aP56371 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab4aP56371 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab4aP56371 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.15□□□□□ -0.14
Rab4aP56371 Gm12366-201ENSMUST00000121722 873 ntBASIC14.15□□□□□ -0.14
Rab4aP56371 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.15□□□□□ -0.14
Rab4aP56371 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab4aP56371 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.15□□□□□ -0.14
Rab4aP56371 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.15□□□□□ -0.14
Rab4aP56371 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.15□□□□□ -0.14
Rab4aP56371 Gm5786-201ENSMUST00000085368 882 ntBASIC14.15□□□□□ -0.14
Rab4aP56371 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab4aP56371 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab4aP56371 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab4aP56371 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab4aP56371 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab4aP56371 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab4aP56371 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab4aP56371 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rab4aP56371 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.14□□□□□ -0.15
Rab4aP56371 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.14□□□□□ -0.15
Rab4aP56371 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.14□□□□□ -0.15
Rab4aP56371 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rab4aP56371 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rab4aP56371 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.14□□□□□ -0.15
Rab4aP56371 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rab4aP56371 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rab4aP56371 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Rab4aP56371 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Rab4aP56371 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.14□□□□□ -0.15
Rab4aP56371 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab4aP56371 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rab4aP56371 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.13□□□□□ -0.15
Rab4aP56371 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab4aP56371 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.13□□□□□ -0.15
Rab4aP56371 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab4aP56371 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab4aP56371 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab4aP56371 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab4aP56371 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab4aP56371 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab4aP56371 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab4aP56371 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab4aP56371 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab4aP56371 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab4aP56371 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab4aP56371 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rab4aP56371 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab4aP56371 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.12□□□□□ -0.15
Rab4aP56371 Gm11175-201ENSMUST00000116172 543 ntBASIC14.12□□□□□ -0.15
Rab4aP56371 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rab4aP56371 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab4aP56371 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab4aP56371 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab4aP56371 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab4aP56371 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab4aP56371 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Rab4aP56371 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.12□□□□□ -0.15
Rab4aP56371 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.11□□□□□ -0.15
Rab4aP56371 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rab4aP56371 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab4aP56371 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms