Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atxn1P54254 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.72■□□□□ 0.43
Atxn1P54254 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atxn1P54254 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atxn1P54254 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Atxn1P54254 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atxn1P54254 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atxn1P54254 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atxn1P54254 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atxn1P54254 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Atxn1P54254 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Atxn1P54254 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atxn1P54254 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atxn1P54254 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Atxn1P54254 Gm42545-201ENSMUST00000202755 922 ntBASIC17.71■□□□□ 0.43
Atxn1P54254 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atxn1P54254 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Atxn1P54254 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atxn1P54254 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Atxn1P54254 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atxn1P54254 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Atxn1P54254 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Atxn1P54254 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Atxn1P54254 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atxn1P54254 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Atxn1P54254 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Atxn1P54254 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atxn1P54254 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atxn1P54254 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atxn1P54254 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.7■□□□□ 0.42
Atxn1P54254 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.7■□□□□ 0.42
Atxn1P54254 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atxn1P54254 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Atxn1P54254 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atxn1P54254 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atxn1P54254 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atxn1P54254 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atxn1P54254 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atxn1P54254 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atxn1P54254 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atxn1P54254 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
Atxn1P54254 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.69■□□□□ 0.42
Atxn1P54254 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Atxn1P54254 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.69■□□□□ 0.42
Atxn1P54254 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn1P54254 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn1P54254 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn1P54254 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn1P54254 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn1P54254 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.68■□□□□ 0.42
Atxn1P54254 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Atxn1P54254 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.68■□□□□ 0.42
Atxn1P54254 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.68■□□□□ 0.42
Atxn1P54254 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn1P54254 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn1P54254 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn1P54254 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn1P54254 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn1P54254 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.68■□□□□ 0.42
Atxn1P54254 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn1P54254 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn1P54254 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn1P54254 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn1P54254 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn1P54254 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn1P54254 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn1P54254 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn1P54254 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn1P54254 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn1P54254 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn1P54254 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Atxn1P54254 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Atxn1P54254 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn1P54254 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn1P54254 Gm10138-203ENSMUST00000206952 366 ntBASIC17.67■□□□□ 0.42
Atxn1P54254 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.67■□□□□ 0.42
Atxn1P54254 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn1P54254 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn1P54254 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn1P54254 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn1P54254 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn1P54254 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn1P54254 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms