Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trove2O08848 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trove2O08848 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trove2O08848 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trove2O08848 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.34■□□□□ 0.53
Trove2O08848 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trove2O08848 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trove2O08848 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trove2O08848 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trove2O08848 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Trove2O08848 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trove2O08848 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trove2O08848 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trove2O08848 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trove2O08848 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trove2O08848 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trove2O08848 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trove2O08848 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trove2O08848 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trove2O08848 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trove2O08848 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trove2O08848 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trove2O08848 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trove2O08848 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Trove2O08848 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trove2O08848 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.33■□□□□ 0.52
Trove2O08848 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trove2O08848 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trove2O08848 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trove2O08848 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trove2O08848 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trove2O08848 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trove2O08848 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trove2O08848 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trove2O08848 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trove2O08848 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trove2O08848 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trove2O08848 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trove2O08848 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trove2O08848 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trove2O08848 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trove2O08848 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trove2O08848 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trove2O08848 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trove2O08848 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trove2O08848 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trove2O08848 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trove2O08848 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.32■□□□□ 0.52
Trove2O08848 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trove2O08848 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trove2O08848 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trove2O08848 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trove2O08848 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trove2O08848 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.32■□□□□ 0.52
Trove2O08848 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trove2O08848 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trove2O08848 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trove2O08848 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trove2O08848 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trove2O08848 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Trove2O08848 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trove2O08848 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trove2O08848 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trove2O08848 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trove2O08848 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trove2O08848 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trove2O08848 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trove2O08848 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trove2O08848 Gm9988-201ENSMUST00000069786 435 ntBASIC18.31■□□□□ 0.52
Trove2O08848 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trove2O08848 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trove2O08848 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trove2O08848 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trove2O08848 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trove2O08848 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.3■□□□□ 0.52
Trove2O08848 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trove2O08848 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trove2O08848 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.3■□□□□ 0.52
Trove2O08848 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trove2O08848 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trove2O08848 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trove2O08848 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.3■□□□□ 0.52
Trove2O08848 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.3■□□□□ 0.52
Trove2O08848 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trove2O08848 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Trove2O08848 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trove2O08848 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trove2O08848 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trove2O08848 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trove2O08848 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trove2O08848 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trove2O08848 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Trove2O08848 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trove2O08848 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trove2O08848 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trove2O08848 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trove2O08848 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trove2O08848 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.29■□□□□ 0.52
Trove2O08848 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trove2O08848 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms