Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav4-3A0A0B4J1K1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav4-3A0A0B4J1K1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav4-3A0A0B4J1K1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4-3A0A0B4J1K1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav4-3A0A0B4J1K1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4-3A0A0B4J1K1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.21□□□□□ -0.46
Trav4-3A0A0B4J1K1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4-3A0A0B4J1K1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trav4-3A0A0B4J1K1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4-3A0A0B4J1K1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav4-3A0A0B4J1K1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4-3A0A0B4J1K1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4-3A0A0B4J1K1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-3A0A0B4J1K1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-3A0A0B4J1K1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-3A0A0B4J1K1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-3A0A0B4J1K1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-3A0A0B4J1K1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.2□□□□□ -0.46
Trav4-3A0A0B4J1K1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav4-3A0A0B4J1K1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav4-3A0A0B4J1K1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gm18755-201ENSMUST00000218030 1099 ntBASIC12.2□□□□□ -0.46
Trav4-3A0A0B4J1K1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-3A0A0B4J1K1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trav4-3A0A0B4J1K1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-3A0A0B4J1K1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-3A0A0B4J1K1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-3A0A0B4J1K1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-3A0A0B4J1K1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-3A0A0B4J1K1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav4-3A0A0B4J1K1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms