Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gm5812-201ENSMUST00000061073 957 ntBASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Dancr-204ENSMUST00000132389 2347 ntBASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gm15546-201ENSMUST00000122095 826 ntBASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms