Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm44695-201ENSMUST00000205567 1631 ntBASIC6.22□□□□□ -1.41
Tpm1P58771 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.22□□□□□ -1.41
Tpm1P58771 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Tpm1P58771 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Tpm1P58771 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Tpm1P58771 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.22□□□□□ -1.41
Tpm1P58771 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6.22□□□□□ -1.41
Tpm1P58771 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Tpm1P58771 Gm13702-201ENSMUST00000118542 825 ntBASIC6.22□□□□□ -1.41
Tpm1P58771 Gm12281-201ENSMUST00000119536 298 ntBASIC6.22□□□□□ -1.41
Tpm1P58771 Gm5405-201ENSMUST00000120478 609 ntBASIC6.22□□□□□ -1.41
Tpm1P58771 Gm14489-201ENSMUST00000120868 901 ntBASIC6.22□□□□□ -1.41
Tpm1P58771 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC6.22□□□□□ -1.41
Tpm1P58771 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.22□□□□□ -1.41
Tpm1P58771 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Tpm1P58771 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Tpm1P58771 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Tpm1P58771 Gm24741-201ENSMUST00000158857 106 ntBASIC6.22□□□□□ -1.41
Tpm1P58771 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Tpm1P58771 Gm9294-201ENSMUST00000165198 789 ntBASIC6.22□□□□□ -1.41
Tpm1P58771 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Tpm1P58771 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.22□□□□□ -1.41
Tpm1P58771 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Tpm1P58771 Gm44539-201ENSMUST00000206010 238 ntBASIC6.22□□□□□ -1.41
Tpm1P58771 Gm44856-201ENSMUST00000206639 304 ntBASIC6.22□□□□□ -1.41
Tpm1P58771 Gm45845-201ENSMUST00000207326 582 ntBASIC6.22□□□□□ -1.41
Tpm1P58771 Gm19921-201ENSMUST00000210505 703 ntBASIC6.22□□□□□ -1.41
Tpm1P58771 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC6.22□□□□□ -1.41
Tpm1P58771 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Tpm1P58771 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Tpm1P58771 Snord59a-201ENSMUST00000082844 74 ntBASIC6.22□□□□□ -1.41
Tpm1P58771 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Tpm1P58771 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Tpm1P58771 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Tpm1P58771 Gm45415-201ENSMUST00000209644 2074 ntBASIC6.22□□□□□ -1.41
Tpm1P58771 Gm37400-201ENSMUST00000193148 3605 ntBASIC6.21□□□□□ -1.41
Tpm1P58771 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Tpm1P58771 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Tpm1P58771 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Tpm1P58771 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Tpm1P58771 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Tpm1P58771 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.21□□□□□ -1.41
Tpm1P58771 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.21□□□□□ -1.41
Tpm1P58771 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Tpm1P58771 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Tpm1P58771 Gm9577-201ENSMUST00000174655 2620 ntBASIC6.21□□□□□ -1.41
Tpm1P58771 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Tpm1P58771 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
Tpm1P58771 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
Tpm1P58771 Gm12939-201ENSMUST00000117303 165 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 Gm13835-201ENSMUST00000118459 685 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 Gm15660-201ENSMUST00000118997 478 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 Gm7494-201ENSMUST00000121248 441 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 Gm15877-201ENSMUST00000121897 964 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.21□□□□□ -1.42
Tpm1P58771 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC6.21□□□□□ -1.42
Tpm1P58771 Gm26069-201ENSMUST00000157497 277 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 Mir1953-201ENSMUST00000157866 89 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 Gm16298-201ENSMUST00000161107 420 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Tpm1P58771 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC6.21□□□□□ -1.42
Tpm1P58771 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC6.21□□□□□ -1.42
Tpm1P58771 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Tpm1P58771 Gm6631-201ENSMUST00000193699 559 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6.21□□□□□ -1.42
Tpm1P58771 Gm7990-201ENSMUST00000212126 593 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 Gm45724-201ENSMUST00000213031 420 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 Gm9088-201ENSMUST00000220237 508 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
Tpm1P58771 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 AC135292.2-201ENSMUST00000227559 367 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Tpm1P58771 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Tpm1P58771 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Tpm1P58771 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Tpm1P58771 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Tpm1P58771 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Tpm1P58771 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Tpm1P58771 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Tpm1P58771 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC6.21□□□□□ -1.42
Tpm1P58771 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Tpm1P58771 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Tpm1P58771 Gm37703-201ENSMUST00000192292 1784 ntBASIC6.21□□□□□ -1.42
Tpm1P58771 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Tpm1P58771 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Tpm1P58771 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Tpm1P58771 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC6.2□□□□□ -1.42
Tpm1P58771 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Tpm1P58771 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Tpm1P58771 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Tpm1P58771 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC6.2□□□□□ -1.42
Tpm1P58771 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.2□□□□□ -1.42
Tpm1P58771 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Tpm1P58771 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Tpm1P58771 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Tpm1P58771 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms