Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Gm12918-201ENSMUST00000120234 636 ntBASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Gm15710-201ENSMUST00000121821 636 ntBASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Gm5075-201ENSMUST00000196916 622 ntBASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RpgrQ9R0X5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Gm6420-201ENSMUST00000193885 723 ntBASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RpgrQ9R0X5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RpgrQ9R0X5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RpgrQ9R0X5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RpgrQ9R0X5 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.17■□□□□ 0.5
RpgrQ9R0X5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.17■□□□□ 0.5
RpgrQ9R0X5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RpgrQ9R0X5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RpgrQ9R0X5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RpgrQ9R0X5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RpgrQ9R0X5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RpgrQ9R0X5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RpgrQ9R0X5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RpgrQ9R0X5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RpgrQ9R0X5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RpgrQ9R0X5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RpgrQ9R0X5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
RpgrQ9R0X5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RpgrQ9R0X5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RpgrQ9R0X5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.16■□□□□ 0.5
RpgrQ9R0X5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RpgrQ9R0X5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RpgrQ9R0X5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RpgrQ9R0X5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RpgrQ9R0X5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RpgrQ9R0X5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.16■□□□□ 0.5
RpgrQ9R0X5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RpgrQ9R0X5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.16■□□□□ 0.5
RpgrQ9R0X5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RpgrQ9R0X5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RpgrQ9R0X5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.16■□□□□ 0.5
RpgrQ9R0X5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RpgrQ9R0X5 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RpgrQ9R0X5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RpgrQ9R0X5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RpgrQ9R0X5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RpgrQ9R0X5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RpgrQ9R0X5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RpgrQ9R0X5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RpgrQ9R0X5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RpgrQ9R0X5 Gm12933-201ENSMUST00000120203 872 ntBASIC18.15■□□□□ 0.5
RpgrQ9R0X5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.15■□□□□ 0.5
RpgrQ9R0X5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.15■□□□□ 0.5
RpgrQ9R0X5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RpgrQ9R0X5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
RpgrQ9R0X5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RpgrQ9R0X5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.15■□□□□ 0.5
RpgrQ9R0X5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RpgrQ9R0X5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms