Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim39Q9ESN2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Gm8495-201ENSMUST00000188740 694 ntBASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim39Q9ESN2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 AV356131-201ENSMUST00000206201 750 ntBASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim39Q9ESN2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim39Q9ESN2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim39Q9ESN2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trim39Q9ESN2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim39Q9ESN2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim39Q9ESN2 Gm7514-201ENSMUST00000209475 934 ntBASIC16.69■□□□□ 0.26
Trim39Q9ESN2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trim39Q9ESN2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim39Q9ESN2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim39Q9ESN2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim39Q9ESN2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim39Q9ESN2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim39Q9ESN2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.69■□□□□ 0.26
Trim39Q9ESN2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms