Protein–RNA interactions for Protein: Q9D6F9

Tubb4a, Tubulin beta-4A chain, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb4aQ9D6F9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Tubb4aQ9D6F9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubb4aQ9D6F9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.38■□□□□ 0.69
Tubb4aQ9D6F9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubb4aQ9D6F9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubb4aQ9D6F9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.38■□□□□ 0.69
Tubb4aQ9D6F9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubb4aQ9D6F9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubb4aQ9D6F9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubb4aQ9D6F9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Tubb4aQ9D6F9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb4aQ9D6F9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubb4aQ9D6F9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubb4aQ9D6F9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Tubb4aQ9D6F9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Tubb4aQ9D6F9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubb4aQ9D6F9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubb4aQ9D6F9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.36■□□□□ 0.69
Tubb4aQ9D6F9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tubb4aQ9D6F9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubb4aQ9D6F9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubb4aQ9D6F9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tubb4aQ9D6F9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
Tubb4aQ9D6F9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.35■□□□□ 0.69
Tubb4aQ9D6F9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubb4aQ9D6F9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.35■□□□□ 0.69
Tubb4aQ9D6F9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Tubb4aQ9D6F9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubb4aQ9D6F9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tubb4aQ9D6F9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Tubb4aQ9D6F9 Gm27801-201ENSMUST00000184174 223 ntBASIC19.35■□□□□ 0.69
Tubb4aQ9D6F9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Tubb4aQ9D6F9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.35■□□□□ 0.69
Tubb4aQ9D6F9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubb4aQ9D6F9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tubb4aQ9D6F9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubb4aQ9D6F9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubb4aQ9D6F9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubb4aQ9D6F9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Tubb4aQ9D6F9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb4aQ9D6F9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb4aQ9D6F9 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.34■□□□□ 0.69
Tubb4aQ9D6F9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb4aQ9D6F9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb4aQ9D6F9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.34■□□□□ 0.69
Tubb4aQ9D6F9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb4aQ9D6F9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.34■□□□□ 0.69
Tubb4aQ9D6F9 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.34■□□□□ 0.69
Tubb4aQ9D6F9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb4aQ9D6F9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb4aQ9D6F9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb4aQ9D6F9 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.34■□□□□ 0.69
Tubb4aQ9D6F9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb4aQ9D6F9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb4aQ9D6F9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb4aQ9D6F9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tubb4aQ9D6F9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tubb4aQ9D6F9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Tubb4aQ9D6F9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Tubb4aQ9D6F9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.33■□□□□ 0.68
Tubb4aQ9D6F9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tubb4aQ9D6F9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubb4aQ9D6F9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubb4aQ9D6F9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubb4aQ9D6F9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubb4aQ9D6F9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubb4aQ9D6F9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubb4aQ9D6F9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubb4aQ9D6F9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubb4aQ9D6F9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tubb4aQ9D6F9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tubb4aQ9D6F9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubb4aQ9D6F9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubb4aQ9D6F9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubb4aQ9D6F9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubb4aQ9D6F9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.32■□□□□ 0.68
Tubb4aQ9D6F9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubb4aQ9D6F9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tubb4aQ9D6F9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubb4aQ9D6F9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms