Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim13Q9CYB0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim13Q9CYB0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim13Q9CYB0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim13Q9CYB0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim13Q9CYB0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim13Q9CYB0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim13Q9CYB0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim13Q9CYB0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim13Q9CYB0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim13Q9CYB0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim13Q9CYB0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim13Q9CYB0 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.59■□□□□ 0.25
Trim13Q9CYB0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim13Q9CYB0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim13Q9CYB0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim13Q9CYB0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim13Q9CYB0 Mir7075-201ENSMUST00000184187 82 ntBASIC16.59■□□□□ 0.25
Trim13Q9CYB0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim13Q9CYB0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trim13Q9CYB0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trim13Q9CYB0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim13Q9CYB0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim13Q9CYB0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim13Q9CYB0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim13Q9CYB0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim13Q9CYB0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim13Q9CYB0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trim13Q9CYB0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trim13Q9CYB0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trim13Q9CYB0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim13Q9CYB0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trim13Q9CYB0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim13Q9CYB0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim13Q9CYB0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim13Q9CYB0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim13Q9CYB0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim13Q9CYB0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim13Q9CYB0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trim13Q9CYB0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Trim13Q9CYB0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trim13Q9CYB0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim13Q9CYB0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim13Q9CYB0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim13Q9CYB0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim13Q9CYB0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim13Q9CYB0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim13Q9CYB0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trim13Q9CYB0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim13Q9CYB0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim13Q9CYB0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim13Q9CYB0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim13Q9CYB0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim13Q9CYB0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim13Q9CYB0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim13Q9CYB0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim13Q9CYB0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim13Q9CYB0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim13Q9CYB0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim13Q9CYB0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim13Q9CYB0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trim13Q9CYB0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Gm43173-201ENSMUST00000202246 593 ntBASIC16.56■□□□□ 0.24
Trim13Q9CYB0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim13Q9CYB0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms