Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 FAM21FP-204ENST00000608637 956 ntBASIC23.57■■□□□ 1.36
U2AF1L4Q8WU68 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
U2AF1L4Q8WU68 AL589743.5-201ENST00000616611 1050 ntBASIC23.57■■□□□ 1.36
U2AF1L4Q8WU68 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
U2AF1L4Q8WU68 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
U2AF1L4Q8WU68 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
U2AF1L4Q8WU68 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
U2AF1L4Q8WU68 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
U2AF1L4Q8WU68 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
U2AF1L4Q8WU68 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
U2AF1L4Q8WU68 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
U2AF1L4Q8WU68 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.56■■□□□ 1.36
U2AF1L4Q8WU68 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.56■■□□□ 1.36
U2AF1L4Q8WU68 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
U2AF1L4Q8WU68 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
U2AF1L4Q8WU68 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
U2AF1L4Q8WU68 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.56■■□□□ 1.36
U2AF1L4Q8WU68 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
U2AF1L4Q8WU68 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.56■■□□□ 1.36
U2AF1L4Q8WU68 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.56■■□□□ 1.36
U2AF1L4Q8WU68 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.56■■□□□ 1.36
U2AF1L4Q8WU68 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.56■■□□□ 1.36
U2AF1L4Q8WU68 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
U2AF1L4Q8WU68 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.56■■□□□ 1.36
U2AF1L4Q8WU68 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
U2AF1L4Q8WU68 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
U2AF1L4Q8WU68 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
U2AF1L4Q8WU68 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
U2AF1L4Q8WU68 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
U2AF1L4Q8WU68 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
U2AF1L4Q8WU68 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
U2AF1L4Q8WU68 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
U2AF1L4Q8WU68 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.55■■□□□ 1.36
U2AF1L4Q8WU68 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC23.55■■□□□ 1.36
U2AF1L4Q8WU68 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.55■■□□□ 1.36
U2AF1L4Q8WU68 AC061975.6-201ENST00000579045 1553 ntBASIC23.55■■□□□ 1.36
U2AF1L4Q8WU68 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
U2AF1L4Q8WU68 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.55■■□□□ 1.36
U2AF1L4Q8WU68 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
U2AF1L4Q8WU68 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 AC097493.4-201ENST00000641197 219 ntBASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
U2AF1L4Q8WU68 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
U2AF1L4Q8WU68 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
U2AF1L4Q8WU68 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
U2AF1L4Q8WU68 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
U2AF1L4Q8WU68 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
U2AF1L4Q8WU68 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.53■■□□□ 1.36
U2AF1L4Q8WU68 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.53■■□□□ 1.36
U2AF1L4Q8WU68 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
U2AF1L4Q8WU68 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.53■■□□□ 1.36
U2AF1L4Q8WU68 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
U2AF1L4Q8WU68 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
U2AF1L4Q8WU68 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
U2AF1L4Q8WU68 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
U2AF1L4Q8WU68 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
U2AF1L4Q8WU68 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 POM121L13P-201ENST00000422362 380 ntBASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 TSPY15P-201ENST00000457163 923 ntBASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 AC012306.2-201ENST00000609350 630 ntBASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 AC092053.2-201ENST00000640557 1818 ntBASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
U2AF1L4Q8WU68 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
U2AF1L4Q8WU68 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.51■■□□□ 1.35
U2AF1L4Q8WU68 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.51■■□□□ 1.35
U2AF1L4Q8WU68 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms