Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.38■□□□□ 0.53
Slc6a4Q60857 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a4Q60857 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a4Q60857 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a4Q60857 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.37■□□□□ 0.53
Slc6a4Q60857 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Slc6a4Q60857 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Slc6a4Q60857 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a4Q60857 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.36■□□□□ 0.53
Slc6a4Q60857 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.36■□□□□ 0.53
Slc6a4Q60857 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a4Q60857 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a4Q60857 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a4Q60857 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a4Q60857 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a4Q60857 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a4Q60857 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a4Q60857 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a4Q60857 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a4Q60857 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a4Q60857 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.35■□□□□ 0.53
Slc6a4Q60857 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.35■□□□□ 0.53
Slc6a4Q60857 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a4Q60857 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a4Q60857 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a4Q60857 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a4Q60857 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a4Q60857 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Slc6a4Q60857 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Slc6a4Q60857 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a4Q60857 Mir7071-201ENSMUST00000184847 69 ntBASIC18.35■□□□□ 0.53
Slc6a4Q60857 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a4Q60857 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Slc6a4Q60857 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a4Q60857 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a4Q60857 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.35■□□□□ 0.53
Slc6a4Q60857 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a4Q60857 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a4Q60857 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a4Q60857 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a4Q60857 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.34■□□□□ 0.53
Slc6a4Q60857 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a4Q60857 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Slc6a4Q60857 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a4Q60857 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.34■□□□□ 0.53
Slc6a4Q60857 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.34■□□□□ 0.53
Slc6a4Q60857 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a4Q60857 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a4Q60857 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.33■□□□□ 0.53
Slc6a4Q60857 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a4Q60857 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a4Q60857 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a4Q60857 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a4Q60857 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.33■□□□□ 0.52
Slc6a4Q60857 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a4Q60857 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a4Q60857 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Slc6a4Q60857 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a4Q60857 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a4Q60857 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a4Q60857 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a4Q60857 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a4Q60857 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a4Q60857 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a4Q60857 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a4Q60857 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a4Q60857 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a4Q60857 Gm15565-201ENSMUST00000118890 427 ntBASIC18.32■□□□□ 0.52
Slc6a4Q60857 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.32■□□□□ 0.52
Slc6a4Q60857 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a4Q60857 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a4Q60857 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Slc6a4Q60857 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a4Q60857 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a4Q60857 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a4Q60857 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.32■□□□□ 0.52
Slc6a4Q60857 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a4Q60857 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Slc6a4Q60857 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.31■□□□□ 0.52
Slc6a4Q60857 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a4Q60857 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms