Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-3Q5R1I1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-3Q5R1I1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-3Q5R1I1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-3Q5R1I1 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.22□□□□□ -0.29
Trav7d-3Q5R1I1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-3Q5R1I1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7d-3Q5R1I1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7d-3Q5R1I1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trav7d-3Q5R1I1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav7d-3Q5R1I1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.19□□□□□ -0.3
Trav7d-3Q5R1I1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Gm10493-201ENSMUST00000097270 612 ntBASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav7d-3Q5R1I1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms