Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Smcr8Q3UMB5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smcr8Q3UMB5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Smcr8Q3UMB5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Smcr8Q3UMB5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smcr8Q3UMB5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smcr8Q3UMB5 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.26■□□□□ 0.67
Smcr8Q3UMB5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smcr8Q3UMB5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smcr8Q3UMB5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smcr8Q3UMB5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Smcr8Q3UMB5 Gm15375-201ENSMUST00000119510 849 ntBASIC19.26■□□□□ 0.67
Smcr8Q3UMB5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Smcr8Q3UMB5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.26■□□□□ 0.67
Smcr8Q3UMB5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.26■□□□□ 0.67
Smcr8Q3UMB5 Rarb-207ENSMUST00000225921 2756 ntBASIC19.26■□□□□ 0.67
Smcr8Q3UMB5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smcr8Q3UMB5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smcr8Q3UMB5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smcr8Q3UMB5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smcr8Q3UMB5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smcr8Q3UMB5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Smcr8Q3UMB5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smcr8Q3UMB5 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.25■□□□□ 0.67
Smcr8Q3UMB5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.25■□□□□ 0.67
Smcr8Q3UMB5 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.25■□□□□ 0.67
Smcr8Q3UMB5 Gm43183-201ENSMUST00000200632 547 ntBASIC19.25■□□□□ 0.67
Smcr8Q3UMB5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smcr8Q3UMB5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
Smcr8Q3UMB5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Smcr8Q3UMB5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smcr8Q3UMB5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smcr8Q3UMB5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smcr8Q3UMB5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Smcr8Q3UMB5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smcr8Q3UMB5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Smcr8Q3UMB5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smcr8Q3UMB5 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smcr8Q3UMB5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smcr8Q3UMB5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smcr8Q3UMB5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smcr8Q3UMB5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Smcr8Q3UMB5 Gm15565-201ENSMUST00000118890 427 ntBASIC19.24■□□□□ 0.67
Smcr8Q3UMB5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smcr8Q3UMB5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Smcr8Q3UMB5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Smcr8Q3UMB5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smcr8Q3UMB5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Gm42545-201ENSMUST00000202755 922 ntBASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Gm18025-201ENSMUST00000221733 862 ntBASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smcr8Q3UMB5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smcr8Q3UMB5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smcr8Q3UMB5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smcr8Q3UMB5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smcr8Q3UMB5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.22■□□□□ 0.67
Smcr8Q3UMB5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smcr8Q3UMB5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smcr8Q3UMB5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smcr8Q3UMB5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smcr8Q3UMB5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.22■□□□□ 0.67
Smcr8Q3UMB5 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smcr8Q3UMB5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smcr8Q3UMB5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smcr8Q3UMB5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Mir5122-201ENSMUST00000175004 89 ntBASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smcr8Q3UMB5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms