Protein–RNA interactions for Protein: Q06263

VTA1, Vacuolar protein sorting-associated protein VTA1, yeastyeast

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTA1Q06263 YMR304C-AYMR304C-A 351 nt2.6□□□□□ -1.99
VTA1Q06263 SWS2YNL081C 432 nt2.6□□□□□ -1.99
VTA1Q06263 RBL2YOR265W 321 nt2.6□□□□□ -1.99
VTA1Q06263 YPL034WYPL034W 498 nt2.6□□□□□ -1.99
VTA1Q06263 GCV2YMR189W 3105 nt2.6□□□□□ -1.99
VTA1Q06263 RRI2YOL117W 1938 nt2.6□□□□□ -1.99
VTA1Q06263 GCD10YNL062C 1437 nt2.59□□□□□ -1.99
VTA1Q06263 SSN2YDR443C 4263 nt2.59□□□□□ -1.99
VTA1Q06263 PEA2YER149C 1263 nt2.59□□□□□ -1.99
VTA1Q06263 YGR293CYGR293C 462 nt2.59□□□□□ -1.99
VTA1Q06263 RGM1YMR182C 636 nt2.59□□□□□ -1.99
VTA1Q06263 SWM2YNR004W 441 nt2.59□□□□□ -1.99
VTA1Q06263 MEI5YPL121C 669 nt2.59□□□□□ -1.99
VTA1Q06263 DNA2YHR164C 4569 nt2.59□□□□□ -1.99
VTA1Q06263 TRA1YHR099W 11235 nt2.59□□□□□ -2
VTA1Q06263 YLR001CYLR001C 2589 nt2.58□□□□□ -2
VTA1Q06263 YDL016CYDL016C 303 nt2.58□□□□□ -2
VTA1Q06263 RPS17BYDR447C 411 nt2.58□□□□□ -2
VTA1Q06263 RPL14BYHL001W 417 nt2.58□□□□□ -2
VTA1Q06263 YLR302CYLR302C 363 nt2.58□□□□□ -2
VTA1Q06263 COQ10YOL008W 624 nt2.58□□□□□ -2
VTA1Q06263 ARF3YOR094W 552 nt2.58□□□□□ -2
VTA1Q06263 OST2YOR103C 393 nt2.58□□□□□ -2
VTA1Q06263 ISU1YPL135W 498 nt2.58□□□□□ -2
VTA1Q06263 GPI17YDR434W 1605 nt2.57□□□□□ -2
VTA1Q06263 YIL166CYIL166C 1629 nt2.57□□□□□ -2
VTA1Q06263 SEC26YDR238C 2922 nt2.57□□□□□ -2
VTA1Q06263 snR76snR76 109 nt2.57□□□□□ -2
VTA1Q06263 MPO1YGL010W 525 nt2.57□□□□□ -2
VTA1Q06263 DFG10YIL049W 762 nt2.57□□□□□ -2
VTA1Q06263 RPS1AYLR441C 768 nt2.57□□□□□ -2
VTA1Q06263 RPL36AYMR194W 303 nt2.57□□□□□ -2
VTA1Q06263 MRPL33YMR286W 261 nt2.57□□□□□ -2
VTA1Q06263 HHT2YNL031C 411 nt2.57□□□□□ -2
VTA1Q06263 YPR172WYPR172W 603 nt2.57□□□□□ -2
VTA1Q06263 GDI1YER136W 1356 nt2.57□□□□□ -2
VTA1Q06263 NAB3YPL190C 2409 nt2.57□□□□□ -2
VTA1Q06263 TPS2YDR074W 2691 nt2.56□□□□□ -2
VTA1Q06263 NFT1YKR103W 3657 nt2.56□□□□□ -2
VTA1Q06263 CHZ1YER030W 462 nt2.56□□□□□ -2
VTA1Q06263 GLC7YER133W 939 nt2.56□□□□□ -2
VTA1Q06263 YIR020CYIR020C 303 nt2.56□□□□□ -2
VTA1Q06263 YKL066WYKL066W 444 nt2.56□□□□□ -2
VTA1Q06263 YMR013C-AYMR013C-A 150 nt2.56□□□□□ -2
VTA1Q06263 RCN2YOR220W 798 nt2.56□□□□□ -2
VTA1Q06263 SGS1YMR190C 4344 nt2.56□□□□□ -2
VTA1Q06263 YER175W-AYER175W-A 165 nt2.55□□□□□ -2
VTA1Q06263 PRS3YHL011C 963 nt2.55□□□□□ -2
VTA1Q06263 OTU2YHL013C 924 nt2.55□□□□□ -2
VTA1Q06263 BET4YJL031C 984 nt2.55□□□□□ -2
VTA1Q06263 STE18YJR086W 333 nt2.55□□□□□ -2
VTA1Q06263 AYT1YLL063C 1425 nt2.55□□□□□ -2
VTA1Q06263 RLP24YLR009W 600 nt2.55□□□□□ -2
VTA1Q06263 HRI1YLR301W 735 nt2.55□□□□□ -2
VTA1Q06263 YNL046WYNL046W 519 nt2.55□□□□□ -2
VTA1Q06263 YBR085C-AYBR085C-A 258 nt2.55□□□□□ -2
VTA1Q06263 snR84snR84 550 nt2.54□□□□□ -2
VTA1Q06263 YDR199WYDR199W 366 nt2.54□□□□□ -2
VTA1Q06263 YER189WYER189W 369 nt2.54□□□□□ -2
VTA1Q06263 LSM2YBL026W 288 nt2.54□□□□□ -2
VTA1Q06263 MPP6YNR024W 561 nt2.54□□□□□ -2
VTA1Q06263 YOL134CYOL134C 390 nt2.54□□□□□ -2
VTA1Q06263 NSL1YPL233W 651 nt2.54□□□□□ -2
VTA1Q06263 SRO77YBL106C 3033 nt2.54□□□□□ -2
VTA1Q06263 YNL034WYNL034W 1839 nt2.54□□□□□ -2
VTA1Q06263 PDR3YBL005W 2931 nt2.53□□□□□ -2
VTA1Q06263 HAA1YPR008W 2085 nt2.53□□□□□ -2
VTA1Q06263 YIL029CYIL029C 429 nt2.53□□□□□ -2
VTA1Q06263 YPR096CYPR096C 303 nt2.53□□□□□ -2
VTA1Q06263 LOA1YPR139C 903 nt2.53□□□□□ -2
VTA1Q06263 SDC25YLL016W 3147 nt2.53□□□□□ -2
VTA1Q06263 RLI1YDR091C 1827 nt2.53□□□□□ -2
VTA1Q06263 PTP3YER075C 2787 nt2.52□□□□□ -2.01
VTA1Q06263 BUB1YGR188C 3066 nt2.52□□□□□ -2.01
VTA1Q06263 YHR032W-AYHR032W-A 180 nt2.52□□□□□ -2.01
VTA1Q06263 VPH2YKL119C 648 nt2.52□□□□□ -2.01
VTA1Q06263 YLR252WYLR252W 306 nt2.52□□□□□ -2.01
VTA1Q06263 YMR194C-AYMR194C-A 225 nt2.52□□□□□ -2.01
VTA1Q06263 YOR283WYOR283W 693 nt2.52□□□□□ -2.01
VTA1Q06263 YBR071WYBR071W 636 nt2.52□□□□□ -2.01
VTA1Q06263 NEW1YPL226W 3591 nt2.51□□□□□ -2.01
VTA1Q06263 YKR078WYKR078W 1758 nt2.51□□□□□ -2.01
VTA1Q06263 YPP1YGR198W 2454 nt2.51□□□□□ -2.01
VTA1Q06263 SSF1YHR066W 1362 nt2.51□□□□□ -2.01
VTA1Q06263 GIN4YDR507C 3429 nt2.51□□□□□ -2.01
VTA1Q06263 KEL2YGR238C 2649 nt2.51□□□□□ -2.01
VTA1Q06263 AHC2YCR082W 387 nt2.51□□□□□ -2.01
VTA1Q06263 CRD1YDL142C 852 nt2.51□□□□□ -2.01
VTA1Q06263 ILM1YJR118C 612 nt2.51□□□□□ -2.01
VTA1Q06263 CSI1YMR025W 888 nt2.51□□□□□ -2.01
VTA1Q06263 UBX4YMR067C 1251 nt2.51□□□□□ -2.01
VTA1Q06263 TRM7YBR061C 933 nt2.51□□□□□ -2.01
VTA1Q06263 PDR11YIL013C 4236 nt2.51□□□□□ -2.01
VTA1Q06263 SWR1YDR334W 4545 nt2.51□□□□□ -2.01
VTA1Q06263 IRA2YOL081W 9240 nt2.5□□□□□ -2.01
VTA1Q06263 PSK2YOL045W 3306 nt2.5□□□□□ -2.01
VTA1Q06263 NAB6YML117W 3405 nt2.5□□□□□ -2.01
VTA1Q06263 YCR081C-AYCR081C-A 237 nt2.5□□□□□ -2.01
VTA1Q06263 HYP2YEL034W 474 nt2.5□□□□□ -2.01
VTA1Q06263 YJR141WYJR141W 1044 nt2.5□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 68.9 ms