Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Xcl1P47993 Gm43808-201ENSMUST00000202534 2065 ntBASIC11.79□□□□□ -0.52
Xcl1P47993 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Xcl1P47993 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC11.79□□□□□ -0.52
Xcl1P47993 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Pkd1-207ENSMUST00000228550 1050 ntBASIC11.79□□□□□ -0.52
Xcl1P47993 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Xcl1P47993 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Xcl1P47993 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC11.78□□□□□ -0.52
Xcl1P47993 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Xcl1P47993 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Xcl1P47993 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Xcl1P47993 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC11.77□□□□□ -0.52
Xcl1P47993 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Xcl1P47993 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Xcl1P47993 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Xcl1P47993 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Xcl1P47993 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.77□□□□□ -0.53
Xcl1P47993 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Xcl1P47993 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Xcl1P47993 Gm11847-201ENSMUST00000125165 1119 ntBASIC11.77□□□□□ -0.53
Xcl1P47993 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC11.77□□□□□ -0.53
Xcl1P47993 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Xcl1P47993 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Xcl1P47993 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Xcl1P47993 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Xcl1P47993 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Xcl1P47993 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Xcl1P47993 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Xcl1P47993 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Xcl1P47993 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Xcl1P47993 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC11.77□□□□□ -0.53
Xcl1P47993 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Xcl1P47993 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Xcl1P47993 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Xcl1P47993 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.76□□□□□ -0.53
Xcl1P47993 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Xcl1P47993 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Xcl1P47993 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Xcl1P47993 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Xcl1P47993 Dancr-204ENSMUST00000132389 2347 ntBASIC11.76□□□□□ -0.53
Xcl1P47993 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Xcl1P47993 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Xcl1P47993 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Xcl1P47993 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Xcl1P47993 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Xcl1P47993 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Xcl1P47993 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC11.76□□□□□ -0.53
Xcl1P47993 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Xcl1P47993 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Xcl1P47993 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Xcl1P47993 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Xcl1P47993 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC11.75□□□□□ -0.53
Xcl1P47993 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xcl1P47993 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Xcl1P47993 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xcl1P47993 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xcl1P47993 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Xcl1P47993 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Xcl1P47993 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xcl1P47993 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms