Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 SPP382YLR424W 2127 nt2.65□□□□□ -1.99
VPS52P39904 BIT61YJL058C 1632 nt2.64□□□□□ -1.99
VPS52P39904 ORC1YML065W 2745 nt2.64□□□□□ -1.99
VPS52P39904 ILS1YBL076C 3219 nt2.64□□□□□ -1.99
VPS52P39904 AHC2YCR082W 387 nt2.64□□□□□ -1.99
VPS52P39904 YDR114CYDR114C 303 nt2.64□□□□□ -1.99
VPS52P39904 YDR157WYDR157W 402 nt2.64□□□□□ -1.99
VPS52P39904 YER066C-AYER066C-A 501 nt2.64□□□□□ -1.99
VPS52P39904 SPC1YJR010C-A 285 nt2.64□□□□□ -1.99
VPS52P39904 GPI14YJR013W 1212 nt2.64□□□□□ -1.99
VPS52P39904 DDR48YMR173W 1293 nt2.64□□□□□ -1.99
VPS52P39904 YNL146C-AYNL146C-A 195 nt2.64□□□□□ -1.99
VPS52P39904 YNL179CYNL179C 438 nt2.64□□□□□ -1.99
VPS52P39904 AVT2YEL064C 1443 nt2.64□□□□□ -1.99
VPS52P39904 SPO23YBR250W 1572 nt2.64□□□□□ -1.99
VPS52P39904 ECM21YBL101C 3354 nt2.64□□□□□ -1.99
VPS52P39904 ECM29YHL030W 5607 nt2.64□□□□□ -1.99
VPS52P39904 HAA1YPR008W 2085 nt2.64□□□□□ -1.99
VPS52P39904 MET5YJR137C 4329 nt2.63□□□□□ -1.99
VPS52P39904 YIL012WYIL012W 342 nt2.63□□□□□ -1.99
VPS52P39904 MRPL38YKL170W 417 nt2.63□□□□□ -1.99
VPS52P39904 YLR230WYLR230W 306 nt2.63□□□□□ -1.99
VPS52P39904 ARV1YLR242C 966 nt2.63□□□□□ -1.99
VPS52P39904 TFB1YDR311W 1929 nt2.63□□□□□ -1.99
VPS52P39904 PDC2YDR081C 2778 nt2.63□□□□□ -1.99
VPS52P39904 ATG13YPR185W 2217 nt2.62□□□□□ -1.99
VPS52P39904 SEC7YDR170C 6030 nt2.62□□□□□ -1.99
VPS52P39904 AST2YER101C 1293 nt2.62□□□□□ -1.99
VPS52P39904 ERP6YGL002W 651 nt2.62□□□□□ -1.99
VPS52P39904 RTS3YGR161C 792 nt2.62□□□□□ -1.99
VPS52P39904 AIM36YMR157C 768 nt2.62□□□□□ -1.99
VPS52P39904 NOP15YNL110C 663 nt2.62□□□□□ -1.99
VPS52P39904 YOL150CYOL150C 312 nt2.62□□□□□ -1.99
VPS52P39904 RPL33AYPL143W 324 nt2.62□□□□□ -1.99
VPS52P39904 RRD2YPL152W 1077 nt2.62□□□□□ -1.99
VPS52P39904 YPR012WYPR012W 255 nt2.62□□□□□ -1.99
VPS52P39904 YPR170W-AYPR170W-A 186 nt2.62□□□□□ -1.99
VPS52P39904 YDR210W-BYDR210W-B 5313 nt2.62□□□□□ -1.99
VPS52P39904 YDR261W-BYDR261W-B 5313 nt2.62□□□□□ -1.99
VPS52P39904 YFL002W-AYFL002W-A 5313 nt2.62□□□□□ -1.99
VPS52P39904 YGR161W-BYGR161W-B 5313 nt2.62□□□□□ -1.99
VPS52P39904 YLR410W-BYLR410W-B 5313 nt2.62□□□□□ -1.99
VPS52P39904 YCL019WYCL019W 5313 nt2.62□□□□□ -1.99
VPS52P39904 PSK1YAL017W 4071 nt2.62□□□□□ -1.99
VPS52P39904 CYR1YJL005W 6081 nt2.61□□□□□ -1.99
VPS52P39904 SRB8YCR081W 4284 nt2.61□□□□□ -1.99
VPS52P39904 TFC4YGR047C 3078 nt2.61□□□□□ -1.99
VPS52P39904 YDR118W-AYDR118W-A 117 nt2.61□□□□□ -1.99
VPS52P39904 YHR086W-AYHR086W-A 162 nt2.61□□□□□ -1.99
VPS52P39904 YHR175W-AYHR175W-A 150 nt2.61□□□□□ -1.99
VPS52P39904 YAL037WYAL037W 804 nt2.61□□□□□ -1.99
VPS52P39904 YLR302CYLR302C 363 nt2.61□□□□□ -1.99
VPS52P39904 YML108WYML108W 318 nt2.61□□□□□ -1.99
VPS52P39904 HHT2YNL031C 411 nt2.61□□□□□ -1.99
VPS52P39904 snR54snR54 86 nt2.61□□□□□ -1.99
VPS52P39904 DIA2YOR080W 2199 nt2.61□□□□□ -1.99
VPS52P39904 TAF2YCR042C 4224 nt2.61□□□□□ -1.99
VPS52P39904 PPN1YDR452W 2025 nt2.61□□□□□ -1.99
VPS52P39904 MUD2YKL074C 1584 nt2.61□□□□□ -1.99
VPS52P39904 YCR064CYCR064C 411 nt2.6□□□□□ -1.99
VPS52P39904 YCR081C-AYCR081C-A 237 nt2.6□□□□□ -1.99
VPS52P39904 AGA2YGL032C 264 nt2.6□□□□□ -1.99
VPS52P39904 YHR028W-AYHR028W-A 321 nt2.6□□□□□ -1.99
VPS52P39904 YKL068W-AYKL068W-A 237 nt2.6□□□□□ -1.99
VPS52P39904 MCR1YKL150W 909 nt2.6□□□□□ -1.99
VPS52P39904 AIM29YKR074W 468 nt2.6□□□□□ -1.99
VPS52P39904 CDC123YLR215C 1083 nt2.6□□□□□ -1.99
VPS52P39904 PRE8YML092C 753 nt2.6□□□□□ -1.99
VPS52P39904 YMR153C-AYMR153C-A 336 nt2.6□□□□□ -1.99
VPS52P39904 YNL046WYNL046W 519 nt2.6□□□□□ -1.99
VPS52P39904 HSP10YOR020C 321 nt2.6□□□□□ -1.99
VPS52P39904 YOR385WYOR385W 873 nt2.6□□□□□ -1.99
VPS52P39904 YPL034WYPL034W 498 nt2.6□□□□□ -1.99
VPS52P39904 EXO84YBR102C 2262 nt2.59□□□□□ -1.99
VPS52P39904 YKR078WYKR078W 1758 nt2.59□□□□□ -1.99
VPS52P39904 MSB2YGR014W 3921 nt2.59□□□□□ -1.99
VPS52P39904 APC11YDL008W 498 nt2.59□□□□□ -1.99
VPS52P39904 YER038W-AYER038W-A 381 nt2.59□□□□□ -1.99
VPS52P39904 RRT13YER066W 558 nt2.59□□□□□ -1.99
VPS52P39904 GET1YGL020C 708 nt2.59□□□□□ -1.99
VPS52P39904 ERV1YGR029W 570 nt2.59□□□□□ -1.99
VPS52P39904 MRP49YKL167C 414 nt2.59□□□□□ -1.99
VPS52P39904 YLR406C-AYLR406C-A 150 nt2.59□□□□□ -1.99
VPS52P39904 SEN15YMR059W 387 nt2.59□□□□□ -1.99
VPS52P39904 CWC22YGR278W 1734 nt2.59□□□□□ -2
VPS52P39904 tR(ACG)Q2tR(ACG)Q2 74 nt2.58□□□□□ -2
VPS52P39904 YMR001C-AYMR001C-A 231 nt2.58□□□□□ -2
VPS52P39904 PKR1YMR123W 369 nt2.58□□□□□ -2
VPS52P39904 BFR1YOR198C 1413 nt2.58□□□□□ -2
VPS52P39904 YLR278CYLR278C 4026 nt2.58□□□□□ -2
VPS52P39904 TRZ1YKR079C 2517 nt2.58□□□□□ -2
VPS52P39904 CDC55YGL190C 1581 nt2.57□□□□□ -2
VPS52P39904 YKL100CYKL100C 1764 nt2.57□□□□□ -2
VPS52P39904 NET1YJL076W 3570 nt2.57□□□□□ -2
VPS52P39904 PNC1YGL037C 651 nt2.57□□□□□ -2
VPS52P39904 YKR033CYKR033C 426 nt2.57□□□□□ -2
VPS52P39904 YLR334CYLR334C 381 nt2.57□□□□□ -2
VPS52P39904 YPL080CYPL080C 327 nt2.57□□□□□ -2
VPS52P39904 IRC16YPR038W 360 nt2.57□□□□□ -2
VPS52P39904 snR191snR191 274 nt2.57□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 31.7 ms