Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf9P20334 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Tnfrsf9P20334 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf9P20334 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf9P20334 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf9P20334 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf9P20334 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf9P20334 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf9P20334 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf9P20334 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf9P20334 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf9P20334 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf9P20334 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Tnfrsf9P20334 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Tnfrsf9P20334 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Tnfrsf9P20334 Gm18666-201ENSMUST00000190039 958 ntBASIC14.55□□□□□ -0.08
Tnfrsf9P20334 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.55□□□□□ -0.08
Tnfrsf9P20334 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf9P20334 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf9P20334 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.55□□□□□ -0.08
Tnfrsf9P20334 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf9P20334 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf9P20334 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Tnfrsf9P20334 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.55□□□□□ -0.08
Tnfrsf9P20334 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf9P20334 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.54□□□□□ -0.08
Tnfrsf9P20334 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.54□□□□□ -0.08
Tnfrsf9P20334 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Tnfrsf9P20334 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Gm15378-201ENSMUST00000121894 207 ntBASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf9P20334 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf9P20334 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf9P20334 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf9P20334 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Tnfrsf9P20334 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf9P20334 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf9P20334 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
Tnfrsf9P20334 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf9P20334 Mir1199-201ENSMUST00000117015 119 ntBASIC14.52□□□□□ -0.09
Tnfrsf9P20334 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf9P20334 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf9P20334 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf9P20334 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Tnfrsf9P20334 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf9P20334 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Tnfrsf9P20334 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf9P20334 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf9P20334 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.52□□□□□ -0.09
Tnfrsf9P20334 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf9P20334 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf9P20334 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf9P20334 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf9P20334 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf9P20334 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf9P20334 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf9P20334 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms