Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
MYCNP04198 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MYCNP04198 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
MYCNP04198 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
MYCNP04198 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC23.37■■□□□ 1.33
MYCNP04198 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
MYCNP04198 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.37■■□□□ 1.33
MYCNP04198 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.37■■□□□ 1.33
MYCNP04198 AC073912.3-201ENST00000624414 853 ntBASIC23.37■■□□□ 1.33
MYCNP04198 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.37■■□□□ 1.33
MYCNP04198 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
MYCNP04198 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
MYCNP04198 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MYCNP04198 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
MYCNP04198 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
MYCNP04198 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.36■■□□□ 1.33
MYCNP04198 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.36■■□□□ 1.33
MYCNP04198 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.36■■□□□ 1.33
MYCNP04198 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
MYCNP04198 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MYCNP04198 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
MYCNP04198 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MYCNP04198 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
MYCNP04198 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MYCNP04198 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MYCNP04198 MCRIP2P1-201ENST00000394346 511 ntBASIC23.35■■□□□ 1.33
MYCNP04198 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
MYCNP04198 MIR1224-201ENST00000408193 85 ntBASIC23.35■■□□□ 1.33
MYCNP04198 EIF2S2P5-201ENST00000457635 968 ntBASIC23.35■■□□□ 1.33
MYCNP04198 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.35■■□□□ 1.33
MYCNP04198 AC007688.1-201ENST00000475592 759 ntBASIC23.35■■□□□ 1.33
MYCNP04198 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.35■■□□□ 1.33
MYCNP04198 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.35■■□□□ 1.33
MYCNP04198 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.35■■□□□ 1.33
MYCNP04198 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.35■■□□□ 1.33
MYCNP04198 C11orf96-202ENST00000528572 1834 ntBASIC23.35■■□□□ 1.33
MYCNP04198 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.35■■□□□ 1.33
MYCNP04198 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.35■■□□□ 1.33
MYCNP04198 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
MYCNP04198 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
MYCNP04198 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
MYCNP04198 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.34■■□□□ 1.33
MYCNP04198 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
MYCNP04198 KRT18P68-201ENST00000392293 1000 ntBASIC23.34■■□□□ 1.33
MYCNP04198 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.34■■□□□ 1.33
MYCNP04198 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC23.34■■□□□ 1.33
MYCNP04198 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.34■■□□□ 1.33
MYCNP04198 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.34■■□□□ 1.33
MYCNP04198 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.34■■□□□ 1.33
MYCNP04198 RN7SL471P-201ENST00000580476 299 ntBASIC23.34■■□□□ 1.33
MYCNP04198 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
MYCNP04198 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MYCNP04198 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
MYCNP04198 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.34■■□□□ 1.33
MYCNP04198 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MYCNP04198 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MYCNP04198 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MYCNP04198 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
MYCNP04198 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MYCNP04198 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MYCNP04198 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.33■■□□□ 1.33
MYCNP04198 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MYCNP04198 AC211429.1-201ENST00000415277 523 ntBASIC23.33■■□□□ 1.33
MYCNP04198 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MYCNP04198 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MYCNP04198 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
MYCNP04198 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.33■■□□□ 1.33
MYCNP04198 ACTG1P22-201ENST00000603793 1099 ntBASIC23.33■■□□□ 1.33
MYCNP04198 REXO1L12P-201ENST00000622156 912 ntBASIC23.33■■□□□ 1.33
MYCNP04198 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.33■■□□□ 1.33
MYCNP04198 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.33■■□□□ 1.33
MYCNP04198 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
MYCNP04198 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
MYCNP04198 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
MYCNP04198 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MYCNP04198 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MYCNP04198 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.32■■□□□ 1.32
MYCNP04198 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.32■■□□□ 1.32
MYCNP04198 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MYCNP04198 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
MYCNP04198 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MYCNP04198 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MYCNP04198 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.32■■□□□ 1.32
MYCNP04198 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.32■■□□□ 1.32
MYCNP04198 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MYCNP04198 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MYCNP04198 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
MYCNP04198 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.32■■□□□ 1.32
MYCNP04198 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.32■■□□□ 1.32
MYCNP04198 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.32■■□□□ 1.32
MYCNP04198 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
MYCNP04198 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MYCNP04198 AC100791.3-201ENST00000617619 330 ntBASIC23.32■■□□□ 1.32
MYCNP04198 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MYCNP04198 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MYCNP04198 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MYCNP04198 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.32■■□□□ 1.32
MYCNP04198 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
MYCNP04198 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
MYCNP04198 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms