Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.97■□□□□ 0.63
Pja1O55176 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pja1O55176 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Pja1O55176 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pja1O55176 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pja1O55176 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pja1O55176 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pja1O55176 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pja1O55176 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pja1O55176 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.97■□□□□ 0.63
Pja1O55176 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
Pja1O55176 Idnk-204ENSMUST00000226010 1898 ntBASIC18.97■□□□□ 0.63
Pja1O55176 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pja1O55176 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.96■□□□□ 0.63
Pja1O55176 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.96■□□□□ 0.63
Pja1O55176 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pja1O55176 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.96■□□□□ 0.63
Pja1O55176 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Pja1O55176 Nespas-201ENSMUST00000143738 1083 ntBASIC18.96■□□□□ 0.63
Pja1O55176 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pja1O55176 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pja1O55176 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pja1O55176 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pja1O55176 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pja1O55176 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pja1O55176 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pja1O55176 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.95■□□□□ 0.62
Pja1O55176 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pja1O55176 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Pja1O55176 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pja1O55176 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pja1O55176 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pja1O55176 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Pja1O55176 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Pja1O55176 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pja1O55176 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pja1O55176 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pja1O55176 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pja1O55176 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pja1O55176 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pja1O55176 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pja1O55176 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pja1O55176 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pja1O55176 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pja1O55176 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pja1O55176 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pja1O55176 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pja1O55176 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pja1O55176 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pja1O55176 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.94■□□□□ 0.62
Pja1O55176 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.94■□□□□ 0.62
Pja1O55176 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.94■□□□□ 0.62
Pja1O55176 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pja1O55176 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Pja1O55176 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pja1O55176 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Pja1O55176 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Pja1O55176 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pja1O55176 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pja1O55176 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pja1O55176 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pja1O55176 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.93■□□□□ 0.62
Pja1O55176 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pja1O55176 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pja1O55176 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pja1O55176 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.92■□□□□ 0.62
Pja1O55176 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pja1O55176 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pja1O55176 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pja1O55176 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Pja1O55176 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pja1O55176 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.92■□□□□ 0.62
Pja1O55176 Gm10493-201ENSMUST00000097270 612 ntBASIC18.92■□□□□ 0.62
Pja1O55176 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pja1O55176 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pja1O55176 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pja1O55176 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pja1O55176 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pja1O55176 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pja1O55176 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pja1O55176 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pja1O55176 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pja1O55176 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pja1O55176 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pja1O55176 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pja1O55176 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pja1O55176 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pja1O55176 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pja1O55176 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.91■□□□□ 0.62
Pja1O55176 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pja1O55176 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pja1O55176 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pja1O55176 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pja1O55176 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pja1O55176 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pja1O55176 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pja1O55176 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pja1O55176 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.9■□□□□ 0.62
Pja1O55176 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pja1O55176 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms