Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Ccdc194A0A140LIT1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc194A0A140LIT1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc194A0A140LIT1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccdc194A0A140LIT1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc194A0A140LIT1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc194A0A140LIT1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccdc194A0A140LIT1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc194A0A140LIT1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc194A0A140LIT1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc194A0A140LIT1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc194A0A140LIT1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc194A0A140LIT1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Ccdc194A0A140LIT1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc194A0A140LIT1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc194A0A140LIT1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc194A0A140LIT1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc194A0A140LIT1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc194A0A140LIT1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc194A0A140LIT1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc194A0A140LIT1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc194A0A140LIT1 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.87■□□□□ 0.45
Ccdc194A0A140LIT1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc194A0A140LIT1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.87■□□□□ 0.45
Ccdc194A0A140LIT1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc194A0A140LIT1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc194A0A140LIT1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc194A0A140LIT1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc194A0A140LIT1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.85■□□□□ 0.45
Ccdc194A0A140LIT1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.85■□□□□ 0.45
Ccdc194A0A140LIT1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc194A0A140LIT1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc194A0A140LIT1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc194A0A140LIT1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc194A0A140LIT1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc194A0A140LIT1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc194A0A140LIT1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc194A0A140LIT1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc194A0A140LIT1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc194A0A140LIT1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc194A0A140LIT1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc194A0A140LIT1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc194A0A140LIT1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc194A0A140LIT1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc194A0A140LIT1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.84■□□□□ 0.45
Ccdc194A0A140LIT1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc194A0A140LIT1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.84■□□□□ 0.45
Ccdc194A0A140LIT1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ccdc194A0A140LIT1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.84■□□□□ 0.45
Ccdc194A0A140LIT1 Gm42642-201ENSMUST00000200683 355 ntBASIC17.84■□□□□ 0.45
Ccdc194A0A140LIT1 Gm10033-202ENSMUST00000211874 928 ntBASIC17.84■□□□□ 0.45
Ccdc194A0A140LIT1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Ccdc194A0A140LIT1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc194A0A140LIT1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc194A0A140LIT1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc194A0A140LIT1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc194A0A140LIT1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
Ccdc194A0A140LIT1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc194A0A140LIT1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc194A0A140LIT1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc194A0A140LIT1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc194A0A140LIT1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc194A0A140LIT1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc194A0A140LIT1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc194A0A140LIT1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.83■□□□□ 0.44
Ccdc194A0A140LIT1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc194A0A140LIT1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.83■□□□□ 0.44
Ccdc194A0A140LIT1 Gm5874-201ENSMUST00000096101 508 ntBASIC17.83■□□□□ 0.44
Ccdc194A0A140LIT1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc194A0A140LIT1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc194A0A140LIT1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc194A0A140LIT1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Ccdc194A0A140LIT1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc194A0A140LIT1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc194A0A140LIT1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc194A0A140LIT1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc194A0A140LIT1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc194A0A140LIT1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc194A0A140LIT1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms