Protein–RNA interactions for Protein: A0A0U1RP99

Ino80e, INO80 complex subunit E (Fragment), mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ino80eA0A0U1RP99 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ino80eA0A0U1RP99 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ino80eA0A0U1RP99 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ino80eA0A0U1RP99 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ino80eA0A0U1RP99 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.88□□□□□ -0.03
Ino80eA0A0U1RP99 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ino80eA0A0U1RP99 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.88□□□□□ -0.03
Ino80eA0A0U1RP99 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ino80eA0A0U1RP99 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 Gm42809-201ENSMUST00000198429 1138 ntBASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ino80eA0A0U1RP99 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ino80eA0A0U1RP99 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.85□□□□□ -0.03
Ino80eA0A0U1RP99 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ino80eA0A0U1RP99 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ino80eA0A0U1RP99 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Ino80eA0A0U1RP99 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Ino80eA0A0U1RP99 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms