Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AC105233.4-201ENST00000642045 216 ntBASIC17.83■□□□□ 0.44
PCDHB16Q9NRJ7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB16Q9NRJ7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHB16Q9NRJ7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PCDHB16Q9NRJ7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB16Q9NRJ7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB16Q9NRJ7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PCDHB16Q9NRJ7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB16Q9NRJ7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB16Q9NRJ7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHB16Q9NRJ7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB16Q9NRJ7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PCDHB16Q9NRJ7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB16Q9NRJ7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB16Q9NRJ7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB16Q9NRJ7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB16Q9NRJ7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB16Q9NRJ7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHB16Q9NRJ7 AC027682.1-201ENST00000562846 899 ntBASIC17.82■□□□□ 0.44
PCDHB16Q9NRJ7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB16Q9NRJ7 AL139246.5-201ENST00000606645 996 ntBASIC17.82■□□□□ 0.44
PCDHB16Q9NRJ7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB16Q9NRJ7 AC106739.1-201ENST00000617035 715 ntBASIC17.82■□□□□ 0.44
PCDHB16Q9NRJ7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB16Q9NRJ7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB16Q9NRJ7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB16Q9NRJ7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 AC006128.1-201ENST00000624704 1661 ntBASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 PBX2P1-201ENST00000493219 1291 ntBASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 AC008764.7-201ENST00000593779 1081 ntBASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 AL157384.1-201ENST00000445995 2473 ntBASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB16Q9NRJ7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 AC055733.4-201ENST00000638462 1354 ntBASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 EDA-201ENST00000338901 1233 ntBASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 BX005040.4-201ENST00000637145 1518 ntBASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 AC005224.4-201ENST00000583262 1652 ntBASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PCDHB16Q9NRJ7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 LETM1P2-201ENST00000597330 2178 ntBASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
PCDHB16Q9NRJ7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms