Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Trim54Q9ERP3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Trim54Q9ERP3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Trim54Q9ERP3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.47■□□□□ 0.71
Trim54Q9ERP3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim54Q9ERP3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim54Q9ERP3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim54Q9ERP3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trim54Q9ERP3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim54Q9ERP3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim54Q9ERP3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim54Q9ERP3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim54Q9ERP3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim54Q9ERP3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim54Q9ERP3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim54Q9ERP3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim54Q9ERP3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trim54Q9ERP3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim54Q9ERP3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim54Q9ERP3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim54Q9ERP3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim54Q9ERP3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim54Q9ERP3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim54Q9ERP3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim54Q9ERP3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Trim54Q9ERP3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim54Q9ERP3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Trim54Q9ERP3 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.46■□□□□ 0.71
Trim54Q9ERP3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim54Q9ERP3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trim54Q9ERP3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim54Q9ERP3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim54Q9ERP3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim54Q9ERP3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim54Q9ERP3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim54Q9ERP3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim54Q9ERP3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim54Q9ERP3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim54Q9ERP3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim54Q9ERP3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim54Q9ERP3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trim54Q9ERP3 Gm11643-201ENSMUST00000119578 864 ntBASIC19.45■□□□□ 0.7
Trim54Q9ERP3 Gm12382-201ENSMUST00000122005 922 ntBASIC19.45■□□□□ 0.7
Trim54Q9ERP3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim54Q9ERP3 Mir6349-201ENSMUST00000184059 97 ntBASIC19.45■□□□□ 0.7
Trim54Q9ERP3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim54Q9ERP3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim54Q9ERP3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim54Q9ERP3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
Trim54Q9ERP3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim54Q9ERP3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim54Q9ERP3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim54Q9ERP3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Trim54Q9ERP3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim54Q9ERP3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim54Q9ERP3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.44■□□□□ 0.7
Trim54Q9ERP3 Gm21814-202ENSMUST00000203277 873 ntBASIC19.44■□□□□ 0.7
Trim54Q9ERP3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.44■□□□□ 0.7
Trim54Q9ERP3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.44■□□□□ 0.7
Trim54Q9ERP3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim54Q9ERP3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Trim54Q9ERP3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim54Q9ERP3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim54Q9ERP3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim54Q9ERP3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim54Q9ERP3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim54Q9ERP3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim54Q9ERP3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim54Q9ERP3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim54Q9ERP3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim54Q9ERP3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim54Q9ERP3 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.43■□□□□ 0.7
Trim54Q9ERP3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim54Q9ERP3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim54Q9ERP3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim54Q9ERP3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim54Q9ERP3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim54Q9ERP3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim54Q9ERP3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim54Q9ERP3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim54Q9ERP3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim54Q9ERP3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim54Q9ERP3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim54Q9ERP3 Gm6433-201ENSMUST00000118634 875 ntBASIC19.42■□□□□ 0.7
Trim54Q9ERP3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim54Q9ERP3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim54Q9ERP3 Gm30025-201ENSMUST00000218555 728 ntBASIC19.42■□□□□ 0.7
Trim54Q9ERP3 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.42■□□□□ 0.7
Trim54Q9ERP3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim54Q9ERP3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim54Q9ERP3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim54Q9ERP3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim54Q9ERP3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim54Q9ERP3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim54Q9ERP3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim54Q9ERP3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim54Q9ERP3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim54Q9ERP3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim54Q9ERP3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim54Q9ERP3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms