Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1lQ9CXF7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1lQ9CXF7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1lQ9CXF7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1lQ9CXF7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1lQ9CXF7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1lQ9CXF7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1lQ9CXF7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Chd1lQ9CXF7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1lQ9CXF7 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 Rps24-207ENSMUST00000224568 714 ntBASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chd1lQ9CXF7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1lQ9CXF7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Chd1lQ9CXF7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1lQ9CXF7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1lQ9CXF7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1lQ9CXF7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1lQ9CXF7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1lQ9CXF7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1lQ9CXF7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Chd1lQ9CXF7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Chd1lQ9CXF7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1lQ9CXF7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1lQ9CXF7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1lQ9CXF7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chd1lQ9CXF7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chd1lQ9CXF7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chd1lQ9CXF7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Chd1lQ9CXF7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.33■□□□□ 0.85
Chd1lQ9CXF7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Chd1lQ9CXF7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chd1lQ9CXF7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Chd1lQ9CXF7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.33■□□□□ 0.85
Chd1lQ9CXF7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chd1lQ9CXF7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chd1lQ9CXF7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd1lQ9CXF7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd1lQ9CXF7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd1lQ9CXF7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd1lQ9CXF7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd1lQ9CXF7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd1lQ9CXF7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd1lQ9CXF7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Chd1lQ9CXF7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1lQ9CXF7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1lQ9CXF7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.32■□□□□ 0.84
Chd1lQ9CXF7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1lQ9CXF7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1lQ9CXF7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1lQ9CXF7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Chd1lQ9CXF7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Chd1lQ9CXF7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1lQ9CXF7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1lQ9CXF7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1lQ9CXF7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1lQ9CXF7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd1lQ9CXF7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chd1lQ9CXF7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd1lQ9CXF7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd1lQ9CXF7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Chd1lQ9CXF7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd1lQ9CXF7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.3■□□□□ 0.84
Chd1lQ9CXF7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.3■□□□□ 0.84
Chd1lQ9CXF7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 7.4 ms