Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF25Q96BH1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF25Q96BH1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
RNF25Q96BH1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF25Q96BH1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF25Q96BH1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF25Q96BH1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF25Q96BH1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF25Q96BH1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.59■■□□□ 1.05
RNF25Q96BH1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF25Q96BH1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF25Q96BH1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF25Q96BH1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.59■■□□□ 1.05
RNF25Q96BH1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
RNF25Q96BH1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF25Q96BH1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF25Q96BH1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF25Q96BH1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF25Q96BH1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF25Q96BH1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF25Q96BH1 AP005212.1-201ENST00000581547 1997 ntBASIC21.58■■□□□ 1.05
RNF25Q96BH1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RNF25Q96BH1 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.58■■□□□ 1.05
RNF25Q96BH1 POU5F1P4-201ENST00000413175 1085 ntBASIC21.58■■□□□ 1.05
RNF25Q96BH1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF25Q96BH1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.58■■□□□ 1.05
RNF25Q96BH1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.58■■□□□ 1.05
RNF25Q96BH1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.58■■□□□ 1.05
RNF25Q96BH1 AC138907.5-202ENST00000569484 235 ntBASIC21.58■■□□□ 1.05
RNF25Q96BH1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.58■■□□□ 1.05
RNF25Q96BH1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF25Q96BH1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
RNF25Q96BH1 GABARAPL3-202ENST00000624044 1851 ntBASIC21.58■■□□□ 1.04
RNF25Q96BH1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
RNF25Q96BH1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
RNF25Q96BH1 AC007225.1-201ENST00000566331 1836 ntBASIC21.57■■□□□ 1.04
RNF25Q96BH1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.57■■□□□ 1.04
RNF25Q96BH1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RNF25Q96BH1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF25Q96BH1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF25Q96BH1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF25Q96BH1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.57■■□□□ 1.04
RNF25Q96BH1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.57■■□□□ 1.04
RNF25Q96BH1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF25Q96BH1 Z99916.3-201ENST00000623422 1080 ntBASIC21.57■■□□□ 1.04
RNF25Q96BH1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF25Q96BH1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RNF25Q96BH1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF25Q96BH1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF25Q96BH1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF25Q96BH1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF25Q96BH1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF25Q96BH1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF25Q96BH1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RNF25Q96BH1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.56■■□□□ 1.04
RNF25Q96BH1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF25Q96BH1 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF25Q96BH1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF25Q96BH1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF25Q96BH1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF25Q96BH1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF25Q96BH1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF25Q96BH1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.56■■□□□ 1.04
RNF25Q96BH1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RNF25Q96BH1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF25Q96BH1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
RNF25Q96BH1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RNF25Q96BH1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF25Q96BH1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF25Q96BH1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF25Q96BH1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF25Q96BH1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RNF25Q96BH1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF25Q96BH1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RNF25Q96BH1 AC104187.1-201ENST00000607510 612 ntBASIC21.55■■□□□ 1.04
RNF25Q96BH1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF25Q96BH1 FP700111.2-201ENST00000619190 1892 ntBASIC21.55■■□□□ 1.04
RNF25Q96BH1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF25Q96BH1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF25Q96BH1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF25Q96BH1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF25Q96BH1 AC007952.6-201ENST00000573168 2673 ntBASIC21.55■■□□□ 1.04
RNF25Q96BH1 AC003957.1-201ENST00000625108 2673 ntBASIC21.55■■□□□ 1.04
RNF25Q96BH1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF25Q96BH1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF25Q96BH1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF25Q96BH1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RNF25Q96BH1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF25Q96BH1 AC027702.1-201ENST00000563810 1770 ntBASIC21.54■■□□□ 1.04
RNF25Q96BH1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF25Q96BH1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF25Q96BH1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RNF25Q96BH1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RNF25Q96BH1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RNF25Q96BH1 ZNRF2P3-201ENST00000424200 374 ntBASIC21.54■■□□□ 1.04
RNF25Q96BH1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.54■■□□□ 1.04
RNF25Q96BH1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
RNF25Q96BH1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF25Q96BH1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF25Q96BH1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms