Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SNIP1Q8TAD8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.51■□□□□ 0.71
SNIP1Q8TAD8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNIP1Q8TAD8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNIP1Q8TAD8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.51■□□□□ 0.71
SNIP1Q8TAD8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.51■□□□□ 0.71
SNIP1Q8TAD8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.51■□□□□ 0.71
SNIP1Q8TAD8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNIP1Q8TAD8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SNIP1Q8TAD8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SNIP1Q8TAD8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
SNIP1Q8TAD8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNIP1Q8TAD8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SNIP1Q8TAD8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNIP1Q8TAD8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNIP1Q8TAD8 TSPY15P-201ENST00000457163 923 ntBASIC19.5■□□□□ 0.71
SNIP1Q8TAD8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.5■□□□□ 0.71
SNIP1Q8TAD8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
SNIP1Q8TAD8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNIP1Q8TAD8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNIP1Q8TAD8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.5■□□□□ 0.71
SNIP1Q8TAD8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
SNIP1Q8TAD8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNIP1Q8TAD8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 TMPOP1-202ENST00000424642 1267 ntBASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 AC110285.5-201ENST00000611501 352 ntBASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 AL023875.1-201ENST00000640777 796 ntBASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 AC137767.1-201ENST00000602918 1920 ntBASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNIP1Q8TAD8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
SNIP1Q8TAD8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNIP1Q8TAD8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNIP1Q8TAD8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNIP1Q8TAD8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.48■□□□□ 0.71
SNIP1Q8TAD8 AL355075.4-201ENST00000554988 638 ntBASIC19.48■□□□□ 0.71
SNIP1Q8TAD8 RARRES2P10-201ENST00000564312 460 ntBASIC19.48■□□□□ 0.71
SNIP1Q8TAD8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SNIP1Q8TAD8 AC105020.6-201ENST00000621523 1217 ntBASIC19.48■□□□□ 0.71
SNIP1Q8TAD8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNIP1Q8TAD8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.48■□□□□ 0.71
SNIP1Q8TAD8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.48■□□□□ 0.71
SNIP1Q8TAD8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SNIP1Q8TAD8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNIP1Q8TAD8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNIP1Q8TAD8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 AC068473.5-201ENST00000616428 2072 ntBASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 AC007322.3-201ENST00000426526 701 ntBASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 KRT18P35-201ENST00000510488 1269 ntBASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNIP1Q8TAD8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.46■□□□□ 0.71
SNIP1Q8TAD8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms