Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.2■□□□□ 0.98
U2af1l4Q8BGJ9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1l4Q8BGJ9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
U2af1l4Q8BGJ9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1l4Q8BGJ9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1l4Q8BGJ9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
U2af1l4Q8BGJ9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1l4Q8BGJ9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1l4Q8BGJ9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1l4Q8BGJ9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2af1l4Q8BGJ9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.19■□□□□ 0.98
U2af1l4Q8BGJ9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2af1l4Q8BGJ9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2af1l4Q8BGJ9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2af1l4Q8BGJ9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2af1l4Q8BGJ9 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.19■□□□□ 0.98
U2af1l4Q8BGJ9 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.19■□□□□ 0.98
U2af1l4Q8BGJ9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2af1l4Q8BGJ9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2af1l4Q8BGJ9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2af1l4Q8BGJ9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2af1l4Q8BGJ9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2af1l4Q8BGJ9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
U2af1l4Q8BGJ9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2af1l4Q8BGJ9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.18■□□□□ 0.98
U2af1l4Q8BGJ9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
U2af1l4Q8BGJ9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2af1l4Q8BGJ9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
U2af1l4Q8BGJ9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2af1l4Q8BGJ9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2af1l4Q8BGJ9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2af1l4Q8BGJ9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
U2af1l4Q8BGJ9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
U2af1l4Q8BGJ9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Dio3-201ENSMUST00000097228 1449 ntBASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Grk6-206ENSMUST00000224995 2971 ntBASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1l4Q8BGJ9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
U2af1l4Q8BGJ9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1l4Q8BGJ9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1l4Q8BGJ9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1l4Q8BGJ9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1l4Q8BGJ9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1l4Q8BGJ9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
U2af1l4Q8BGJ9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.16■□□□□ 0.98
U2af1l4Q8BGJ9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1l4Q8BGJ9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1l4Q8BGJ9 Gm9987-201ENSMUST00000069768 567 ntBASIC21.16■□□□□ 0.98
U2af1l4Q8BGJ9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1l4Q8BGJ9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1l4Q8BGJ9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.15■□□□□ 0.98
U2af1l4Q8BGJ9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.15■□□□□ 0.98
U2af1l4Q8BGJ9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.15■□□□□ 0.98
U2af1l4Q8BGJ9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1l4Q8BGJ9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
U2af1l4Q8BGJ9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1l4Q8BGJ9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1l4Q8BGJ9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
U2af1l4Q8BGJ9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1l4Q8BGJ9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1l4Q8BGJ9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1l4Q8BGJ9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1l4Q8BGJ9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
U2af1l4Q8BGJ9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
U2af1l4Q8BGJ9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.14■□□□□ 0.98
U2af1l4Q8BGJ9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.14■□□□□ 0.98
U2af1l4Q8BGJ9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
U2af1l4Q8BGJ9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
U2af1l4Q8BGJ9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
U2af1l4Q8BGJ9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.14■□□□□ 0.97
U2af1l4Q8BGJ9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.14■□□□□ 0.97
U2af1l4Q8BGJ9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.14■□□□□ 0.97
U2af1l4Q8BGJ9 Gm10698-201ENSMUST00000182663 604 ntBASIC21.14■□□□□ 0.97
U2af1l4Q8BGJ9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.14■□□□□ 0.97
U2af1l4Q8BGJ9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
U2af1l4Q8BGJ9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
U2af1l4Q8BGJ9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
U2af1l4Q8BGJ9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms