Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctdp1Q7TSG2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctdp1Q7TSG2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctdp1Q7TSG2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.62■□□□□ 0.73
Ctdp1Q7TSG2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctdp1Q7TSG2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctdp1Q7TSG2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ctdp1Q7TSG2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctdp1Q7TSG2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctdp1Q7TSG2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctdp1Q7TSG2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.62■□□□□ 0.73
Ctdp1Q7TSG2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctdp1Q7TSG2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ctdp1Q7TSG2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctdp1Q7TSG2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctdp1Q7TSG2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctdp1Q7TSG2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctdp1Q7TSG2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctdp1Q7TSG2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.61■□□□□ 0.73
Ctdp1Q7TSG2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ctdp1Q7TSG2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctdp1Q7TSG2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctdp1Q7TSG2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctdp1Q7TSG2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctdp1Q7TSG2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctdp1Q7TSG2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ctdp1Q7TSG2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.6■□□□□ 0.73
Ctdp1Q7TSG2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Gm42642-201ENSMUST00000200683 355 ntBASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctdp1Q7TSG2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Ctdp1Q7TSG2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ctdp1Q7TSG2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ctdp1Q7TSG2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ctdp1Q7TSG2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
Ctdp1Q7TSG2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ctdp1Q7TSG2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ctdp1Q7TSG2 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.58■□□□□ 0.72
Ctdp1Q7TSG2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ctdp1Q7TSG2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ctdp1Q7TSG2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctdp1Q7TSG2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ctdp1Q7TSG2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctdp1Q7TSG2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctdp1Q7TSG2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ctdp1Q7TSG2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctdp1Q7TSG2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.57■□□□□ 0.72
Ctdp1Q7TSG2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctdp1Q7TSG2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Ctdp1Q7TSG2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.57■□□□□ 0.72
Ctdp1Q7TSG2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctdp1Q7TSG2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.57■□□□□ 0.72
Ctdp1Q7TSG2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctdp1Q7TSG2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctdp1Q7TSG2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ctdp1Q7TSG2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ctdp1Q7TSG2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ctdp1Q7TSG2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ctdp1Q7TSG2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ctdp1Q7TSG2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.56■□□□□ 0.72
Ctdp1Q7TSG2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ctdp1Q7TSG2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ctdp1Q7TSG2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.56■□□□□ 0.72
Ctdp1Q7TSG2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.56■□□□□ 0.72
Ctdp1Q7TSG2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms