Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 AC133637.1-201ENST00000624115 1537 ntBASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 MIR572-201ENST00000384983 95 ntBASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 AC092437.1-201ENST00000624794 1048 ntBASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
FOXR1Q6PIV2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.39■■□□□ 1.02
FOXR1Q6PIV2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
FOXR1Q6PIV2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.39■■□□□ 1.02
FOXR1Q6PIV2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
FOXR1Q6PIV2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 AC027612.3-201ENST00000413684 1047 ntBASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
FOXR1Q6PIV2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 CCDC92B-201ENST00000575506 885 ntBASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR1Q6PIV2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 AC123595.1-201ENST00000440769 1046 ntBASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 AC010525.1-201ENST00000585559 441 ntBASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 AL354811.1-201ENST00000610286 706 ntBASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.37■■□□□ 1.01
FOXR1Q6PIV2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXR1Q6PIV2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXR1Q6PIV2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXR1Q6PIV2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.36■■□□□ 1.01
FOXR1Q6PIV2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
FOXR1Q6PIV2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXR1Q6PIV2 AC026471.6-201ENST00000622954 1905 ntBASIC21.36■■□□□ 1.01
FOXR1Q6PIV2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
FOXR1Q6PIV2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.36■■□□□ 1.01
FOXR1Q6PIV2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms