Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1bP61025 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1bP61025 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cks1bP61025 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1bP61025 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Cks1bP61025 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1bP61025 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC12.83□□□□□ -0.36
Cks1bP61025 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1bP61025 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Cks1bP61025 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1bP61025 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1bP61025 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1bP61025 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1bP61025 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1bP61025 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1bP61025 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC12.83□□□□□ -0.36
Cks1bP61025 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1bP61025 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1bP61025 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1bP61025 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1bP61025 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1bP61025 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1bP61025 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC12.82□□□□□ -0.36
Cks1bP61025 AC154266.1-201ENSMUST00000223190 503 ntBASIC12.82□□□□□ -0.36
Cks1bP61025 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1bP61025 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1bP61025 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1bP61025 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1bP61025 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1bP61025 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1bP61025 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cks1bP61025 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cks1bP61025 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1bP61025 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cks1bP61025 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cks1bP61025 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cks1bP61025 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cks1bP61025 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cks1bP61025 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.81□□□□□ -0.36
Cks1bP61025 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cks1bP61025 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cks1bP61025 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cks1bP61025 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cks1bP61025 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cks1bP61025 Gm8770-201ENSMUST00000121113 1109 ntBASIC12.81□□□□□ -0.36
Cks1bP61025 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.81□□□□□ -0.36
Cks1bP61025 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.81□□□□□ -0.36
Cks1bP61025 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cks1bP61025 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1bP61025 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1bP61025 Gm10571-201ENSMUST00000097869 1638 ntBASIC12.8□□□□□ -0.36
Cks1bP61025 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1bP61025 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1bP61025 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1bP61025 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1bP61025 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1bP61025 Gm6085-201ENSMUST00000182774 1470 ntBASIC12.8□□□□□ -0.36
Cks1bP61025 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1bP61025 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.8□□□□□ -0.36
Cks1bP61025 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1bP61025 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1bP61025 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cks1bP61025 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cks1bP61025 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1bP61025 Gm5522-201ENSMUST00000189483 1242 ntBASIC12.8□□□□□ -0.36
Cks1bP61025 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1bP61025 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Cks1bP61025 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1bP61025 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1bP61025 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cks1bP61025 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1bP61025 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cks1bP61025 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cks1bP61025 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 AC124603.1-201ENSMUST00000223843 308 ntBASIC12.79□□□□□ -0.36
Cks1bP61025 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms