Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rab4aP56371 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab4aP56371 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rab4aP56371 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Rab4aP56371 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.24□□□□□ -0.13
Rab4aP56371 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab4aP56371 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rab4aP56371 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rab4aP56371 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Rab4aP56371 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.24□□□□□ -0.13
Rab4aP56371 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab4aP56371 Mir6236-201ENSMUST00000184437 123 ntBASIC14.24□□□□□ -0.13
Rab4aP56371 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab4aP56371 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab4aP56371 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rab4aP56371 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab4aP56371 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab4aP56371 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Rab4aP56371 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab4aP56371 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab4aP56371 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Rab4aP56371 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab4aP56371 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rab4aP56371 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab4aP56371 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rab4aP56371 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rab4aP56371 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab4aP56371 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.23□□□□□ -0.13
Rab4aP56371 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab4aP56371 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rab4aP56371 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rab4aP56371 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab4aP56371 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rab4aP56371 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.23□□□□□ -0.13
Rab4aP56371 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.23□□□□□ -0.13
Rab4aP56371 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.23□□□□□ -0.13
Rab4aP56371 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab4aP56371 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rab4aP56371 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.23□□□□□ -0.13
Rab4aP56371 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab4aP56371 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rab4aP56371 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.22□□□□□ -0.13
Rab4aP56371 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rab4aP56371 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.22□□□□□ -0.13
Rab4aP56371 Gm7143-201ENSMUST00000222811 859 ntBASIC14.22□□□□□ -0.13
Rab4aP56371 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.22□□□□□ -0.13
Rab4aP56371 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab4aP56371 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rab4aP56371 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.21□□□□□ -0.13
Rab4aP56371 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab4aP56371 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab4aP56371 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rab4aP56371 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab4aP56371 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab4aP56371 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab4aP56371 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab4aP56371 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab4aP56371 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab4aP56371 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab4aP56371 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC14.21□□□□□ -0.13
Rab4aP56371 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.21□□□□□ -0.13
Rab4aP56371 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rab4aP56371 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab4aP56371 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rab4aP56371 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rab4aP56371 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rab4aP56371 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Rab4aP56371 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Rab4aP56371 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Rab4aP56371 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Rab4aP56371 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rab4aP56371 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rab4aP56371 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rab4aP56371 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms