Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sdc2P43407 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Sdc2P43407 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sdc2P43407 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sdc2P43407 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sdc2P43407 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sdc2P43407 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sdc2P43407 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.19■□□□□ 0.82
Sdc2P43407 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sdc2P43407 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Sdc2P43407 Gm18671-201ENSMUST00000214826 683 ntBASIC20.19■□□□□ 0.82
Sdc2P43407 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sdc2P43407 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sdc2P43407 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Sdc2P43407 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sdc2P43407 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.19■□□□□ 0.82
Sdc2P43407 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sdc2P43407 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Sdc2P43407 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sdc2P43407 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sdc2P43407 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sdc2P43407 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sdc2P43407 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sdc2P43407 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sdc2P43407 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Sdc2P43407 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Sdc2P43407 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sdc2P43407 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Sdc2P43407 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.18■□□□□ 0.82
Sdc2P43407 Gm42642-201ENSMUST00000200683 355 ntBASIC20.18■□□□□ 0.82
Sdc2P43407 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.18■□□□□ 0.82
Sdc2P43407 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Sdc2P43407 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sdc2P43407 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Sdc2P43407 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sdc2P43407 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdc2P43407 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Sdc2P43407 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sdc2P43407 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdc2P43407 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdc2P43407 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdc2P43407 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.17■□□□□ 0.82
Sdc2P43407 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdc2P43407 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.17■□□□□ 0.82
Sdc2P43407 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdc2P43407 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdc2P43407 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdc2P43407 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdc2P43407 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdc2P43407 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdc2P43407 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sdc2P43407 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sdc2P43407 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Sdc2P43407 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sdc2P43407 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.16■□□□□ 0.82
Sdc2P43407 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
Sdc2P43407 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Sdc2P43407 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.16■□□□□ 0.82
Sdc2P43407 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.16■□□□□ 0.82
Sdc2P43407 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sdc2P43407 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sdc2P43407 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Sdc2P43407 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc2P43407 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc2P43407 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc2P43407 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.15■□□□□ 0.82
Sdc2P43407 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.15■□□□□ 0.82
Sdc2P43407 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc2P43407 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc2P43407 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc2P43407 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc2P43407 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc2P43407 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc2P43407 Gm5874-201ENSMUST00000096101 508 ntBASIC20.15■□□□□ 0.82
Sdc2P43407 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Sdc2P43407 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc2P43407 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc2P43407 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc2P43407 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc2P43407 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.15■□□□□ 0.82
Sdc2P43407 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sdc2P43407 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.14■□□□□ 0.81
Sdc2P43407 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.14■□□□□ 0.81
Sdc2P43407 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.14■□□□□ 0.81
Sdc2P43407 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sdc2P43407 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.14■□□□□ 0.81
Sdc2P43407 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.14■□□□□ 0.81
Sdc2P43407 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sdc2P43407 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Sdc2P43407 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sdc2P43407 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Sdc2P43407 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sdc2P43407 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Sdc2P43407 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sdc2P43407 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sdc2P43407 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sdc2P43407 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdc2P43407 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdc2P43407 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sdc2P43407 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms