Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TPM3P06753 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.06■■□□□ 1.28
TPM3P06753 DUX4L19-201ENST00000557448 1267 ntBASIC23.06■■□□□ 1.28
TPM3P06753 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.06■■□□□ 1.28
TPM3P06753 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.06■■□□□ 1.28
TPM3P06753 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TPM3P06753 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TPM3P06753 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TPM3P06753 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TPM3P06753 SYT6-210ENST00000641643 1587 ntBASIC23.06■■□□□ 1.28
TPM3P06753 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.06■■□□□ 1.28
TPM3P06753 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
TPM3P06753 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TPM3P06753 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TPM3P06753 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TPM3P06753 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.05■■□□□ 1.28
TPM3P06753 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.05■■□□□ 1.28
TPM3P06753 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
TPM3P06753 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TPM3P06753 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.05■■□□□ 1.28
TPM3P06753 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
TPM3P06753 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TPM3P06753 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TPM3P06753 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.05■■□□□ 1.28
TPM3P06753 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TPM3P06753 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
TPM3P06753 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
TPM3P06753 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TPM3P06753 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TPM3P06753 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.04■■□□□ 1.28
TPM3P06753 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TPM3P06753 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TPM3P06753 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
TPM3P06753 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TPM3P06753 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TPM3P06753 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
TPM3P06753 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TPM3P06753 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TPM3P06753 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TPM3P06753 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
TPM3P06753 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
TPM3P06753 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TPM3P06753 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TPM3P06753 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TPM3P06753 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
TPM3P06753 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TPM3P06753 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.03■■□□□ 1.28
TPM3P06753 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
TPM3P06753 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.03■■□□□ 1.28
TPM3P06753 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
TPM3P06753 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
TPM3P06753 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TPM3P06753 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TPM3P06753 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
TPM3P06753 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.03■■□□□ 1.28
TPM3P06753 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC23.03■■□□□ 1.28
TPM3P06753 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TPM3P06753 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TPM3P06753 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TPM3P06753 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.02■■□□□ 1.28
TPM3P06753 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TPM3P06753 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TPM3P06753 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TPM3P06753 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TPM3P06753 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.02■■□□□ 1.28
TPM3P06753 AC136469.2-201ENST00000623944 1028 ntBASIC23.02■■□□□ 1.28
TPM3P06753 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TPM3P06753 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TPM3P06753 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TPM3P06753 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TPM3P06753 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
TPM3P06753 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
TPM3P06753 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TPM3P06753 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TPM3P06753 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TPM3P06753 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
TPM3P06753 AL512408.1-201ENST00000569378 2000 ntBASIC23.01■■□□□ 1.27
TPM3P06753 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TPM3P06753 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TPM3P06753 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
TPM3P06753 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.01■■□□□ 1.27
TPM3P06753 AC099778.1-201ENST00000568593 1911 ntBASIC23.01■■□□□ 1.27
TPM3P06753 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TPM3P06753 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TPM3P06753 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
TPM3P06753 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
TPM3P06753 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC23■■□□□ 1.27
TPM3P06753 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TPM3P06753 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23■■□□□ 1.27
TPM3P06753 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23■■□□□ 1.27
TPM3P06753 SERBP1P1-201ENST00000396021 1160 ntBASIC23■■□□□ 1.27
TPM3P06753 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23■■□□□ 1.27
TPM3P06753 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23■■□□□ 1.27
TPM3P06753 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23■■□□□ 1.27
TPM3P06753 AC011298.3-201ENST00000615796 283 ntBASIC23■■□□□ 1.27
TPM3P06753 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
TPM3P06753 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TPM3P06753 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23■■□□□ 1.27
TPM3P06753 AC112907.3-201ENST00000577781 2400 ntBASIC23■■□□□ 1.27
TPM3P06753 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms