Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cldn1O88551 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cldn1O88551 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldn1O88551 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.41■□□□□ 0.06
Cldn1O88551 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cldn1O88551 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cldn1O88551 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldn1O88551 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.4■□□□□ 0.06
Cldn1O88551 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldn1O88551 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldn1O88551 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cldn1O88551 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldn1O88551 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldn1O88551 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.4■□□□□ 0.06
Cldn1O88551 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldn1O88551 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cldn1O88551 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldn1O88551 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cldn1O88551 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldn1O88551 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldn1O88551 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cldn1O88551 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldn1O88551 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cldn1O88551 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldn1O88551 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.39■□□□□ 0.05
Cldn1O88551 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.39■□□□□ 0.05
Cldn1O88551 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldn1O88551 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.39■□□□□ 0.05
Cldn1O88551 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.39■□□□□ 0.05
Cldn1O88551 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldn1O88551 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldn1O88551 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldn1O88551 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cldn1O88551 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldn1O88551 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldn1O88551 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldn1O88551 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldn1O88551 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldn1O88551 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldn1O88551 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cldn1O88551 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldn1O88551 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldn1O88551 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldn1O88551 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldn1O88551 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldn1O88551 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Cldn1O88551 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldn1O88551 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldn1O88551 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cldn1O88551 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldn1O88551 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldn1O88551 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldn1O88551 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cldn1O88551 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldn1O88551 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cldn1O88551 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldn1O88551 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldn1O88551 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.37■□□□□ 0.05
Cldn1O88551 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cldn1O88551 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldn1O88551 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.37■□□□□ 0.05
Cldn1O88551 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cldn1O88551 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldn1O88551 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.37■□□□□ 0.05
Cldn1O88551 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cldn1O88551 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldn1O88551 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldn1O88551 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldn1O88551 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldn1O88551 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cldn1O88551 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldn1O88551 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cldn1O88551 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldn1O88551 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldn1O88551 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cldn1O88551 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldn1O88551 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldn1O88551 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cldn1O88551 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cldn1O88551 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cldn1O88551 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cldn1O88551 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cldn1O88551 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cldn1O88551 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cldn1O88551 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cldn1O88551 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cldn1O88551 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cldn1O88551 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Cldn1O88551 Gm10517-202ENSMUST00000192970 758 ntBASIC15.36■□□□□ 0.05
Cldn1O88551 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.36■□□□□ 0.05
Cldn1O88551 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cldn1O88551 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cldn1O88551 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cldn1O88551 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.36■□□□□ 0.05
Cldn1O88551 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cldn1O88551 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cldn1O88551 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cldn1O88551 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cldn1O88551 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.36■□□□□ 0.05
Cldn1O88551 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms