Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.52□□□□□ -0.4
Trav4n-4A0A075B615 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4n-4A0A075B615 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4n-4A0A075B615 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4n-4A0A075B615 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav4n-4A0A075B615 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Trav4n-4A0A075B615 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trav4n-4A0A075B615 Gm10420-201ENSMUST00000121713 882 ntBASIC12.52□□□□□ -0.41
Trav4n-4A0A075B615 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4n-4A0A075B615 Serp2-204ENSMUST00000228055 705 ntBASIC12.52□□□□□ -0.41
Trav4n-4A0A075B615 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav4n-4A0A075B615 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC12.52□□□□□ -0.41
Trav4n-4A0A075B615 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4n-4A0A075B615 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4n-4A0A075B615 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav4n-4A0A075B615 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4n-4A0A075B615 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4n-4A0A075B615 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav4n-4A0A075B615 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4n-4A0A075B615 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4n-4A0A075B615 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav4n-4A0A075B615 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4n-4A0A075B615 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Gm9870-201ENSMUST00000063874 645 ntBASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4n-4A0A075B615 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trav4n-4A0A075B615 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms