Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Herpud1Q9JJK5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Herpud1Q9JJK5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Herpud1Q9JJK5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Herpud1Q9JJK5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Herpud1Q9JJK5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Herpud1Q9JJK5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Herpud1Q9JJK5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Herpud1Q9JJK5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Herpud1Q9JJK5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.04■□□□□ -0
Herpud1Q9JJK5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Herpud1Q9JJK5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.04■□□□□ -0
Herpud1Q9JJK5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Herpud1Q9JJK5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Herpud1Q9JJK5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.04■□□□□ -0
Herpud1Q9JJK5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Herpud1Q9JJK5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Herpud1Q9JJK5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Herpud1Q9JJK5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Herpud1Q9JJK5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Herpud1Q9JJK5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Herpud1Q9JJK5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Herpud1Q9JJK5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Herpud1Q9JJK5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Herpud1Q9JJK5 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.03■□□□□ -0
Herpud1Q9JJK5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Herpud1Q9JJK5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.03■□□□□ -0
Herpud1Q9JJK5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.03■□□□□ -0
Herpud1Q9JJK5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.03■□□□□ -0
Herpud1Q9JJK5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.03■□□□□ -0
Herpud1Q9JJK5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Herpud1Q9JJK5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Herpud1Q9JJK5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.03■□□□□ -0
Herpud1Q9JJK5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Herpud1Q9JJK5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Herpud1Q9JJK5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Herpud1Q9JJK5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Herpud1Q9JJK5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Herpud1Q9JJK5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Herpud1Q9JJK5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Herpud1Q9JJK5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Herpud1Q9JJK5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Herpud1Q9JJK5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Herpud1Q9JJK5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Herpud1Q9JJK5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Herpud1Q9JJK5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.02■□□□□ -0
Herpud1Q9JJK5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.02□□□□□ -0.01
Herpud1Q9JJK5 Fst-202ENSMUST00000223640 2612 ntBASIC15.02□□□□□ -0.01
Herpud1Q9JJK5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Herpud1Q9JJK5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Herpud1Q9JJK5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Herpud1Q9JJK5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Herpud1Q9JJK5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Herpud1Q9JJK5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Herpud1Q9JJK5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Herpud1Q9JJK5 Gm10655-201ENSMUST00000098658 1397 ntBASIC15□□□□□ -0.01
Herpud1Q9JJK5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15□□□□□ -0.01
Herpud1Q9JJK5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15□□□□□ -0.01
Herpud1Q9JJK5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Herpud1Q9JJK5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Herpud1Q9JJK5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Herpud1Q9JJK5 Gm10493-201ENSMUST00000097270 612 ntBASIC15□□□□□ -0.01
Herpud1Q9JJK5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15□□□□□ -0.01
Herpud1Q9JJK5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Herpud1Q9JJK5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Herpud1Q9JJK5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Herpud1Q9JJK5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Herpud1Q9JJK5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15□□□□□ -0.01
Herpud1Q9JJK5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Herpud1Q9JJK5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Herpud1Q9JJK5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Herpud1Q9JJK5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Herpud1Q9JJK5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Herpud1Q9JJK5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Herpud1Q9JJK5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Herpud1Q9JJK5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Herpud1Q9JJK5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Herpud1Q9JJK5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Herpud1Q9JJK5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Herpud1Q9JJK5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms