Protein–RNA interactions for Protein: Q9HCJ2

LRRC4C, Leucine-rich repeat-containing protein 4C, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4CQ9HCJ2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC4CQ9HCJ2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC4CQ9HCJ2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC4CQ9HCJ2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC4CQ9HCJ2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
LRRC4CQ9HCJ2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.2■□□□□ 0.98
LRRC4CQ9HCJ2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC4CQ9HCJ2 AC121338.2-201ENST00000622535 1744 ntBASIC21.2■□□□□ 0.98
LRRC4CQ9HCJ2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC4CQ9HCJ2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC4CQ9HCJ2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC4CQ9HCJ2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
LRRC4CQ9HCJ2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC4CQ9HCJ2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC4CQ9HCJ2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC4CQ9HCJ2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC4CQ9HCJ2 UNC93B3-201ENST00000308076 687 ntBASIC21.19■□□□□ 0.98
LRRC4CQ9HCJ2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
LRRC4CQ9HCJ2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.19■□□□□ 0.98
LRRC4CQ9HCJ2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC4CQ9HCJ2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.19■□□□□ 0.98
LRRC4CQ9HCJ2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.19■□□□□ 0.98
LRRC4CQ9HCJ2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC4CQ9HCJ2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC4CQ9HCJ2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC4CQ9HCJ2 AC099778.1-201ENST00000568593 1911 ntBASIC21.19■□□□□ 0.98
LRRC4CQ9HCJ2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
LRRC4CQ9HCJ2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC4CQ9HCJ2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 AL136162.1-201ENST00000607711 1078 ntBASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC4CQ9HCJ2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 BX842568.3-201ENST00000418104 571 ntBASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 AC105265.2-201ENST00000467189 838 ntBASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 MIR6821-201ENST00000617625 74 ntBASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC4CQ9HCJ2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC4CQ9HCJ2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC4CQ9HCJ2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC4CQ9HCJ2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC4CQ9HCJ2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC4CQ9HCJ2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.16■□□□□ 0.98
LRRC4CQ9HCJ2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC4CQ9HCJ2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LRRC4CQ9HCJ2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC4CQ9HCJ2 AL355001.2-201ENST00000620617 1191 ntBASIC21.16■□□□□ 0.98
LRRC4CQ9HCJ2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.16■□□□□ 0.98
LRRC4CQ9HCJ2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.16■□□□□ 0.98
LRRC4CQ9HCJ2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.16■□□□□ 0.98
LRRC4CQ9HCJ2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC4CQ9HCJ2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC4CQ9HCJ2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.15■□□□□ 0.98
LRRC4CQ9HCJ2 AL020996.1-203ENST00000536896 2307 ntBASIC21.15■□□□□ 0.98
LRRC4CQ9HCJ2 AC055733.4-201ENST00000638462 1354 ntBASIC21.15■□□□□ 0.98
LRRC4CQ9HCJ2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC4CQ9HCJ2 EDA-201ENST00000338901 1233 ntBASIC21.15■□□□□ 0.98
LRRC4CQ9HCJ2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LRRC4CQ9HCJ2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC4CQ9HCJ2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.15■□□□□ 0.98
LRRC4CQ9HCJ2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC4CQ9HCJ2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC4CQ9HCJ2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.15■□□□□ 0.98
LRRC4CQ9HCJ2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LRRC4CQ9HCJ2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC4CQ9HCJ2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC4CQ9HCJ2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.15■□□□□ 0.98
LRRC4CQ9HCJ2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LRRC4CQ9HCJ2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
LRRC4CQ9HCJ2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LRRC4CQ9HCJ2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms