Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.78■□□□□ 0.28
Cdc40Q9DC48 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdc40Q9DC48 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdc40Q9DC48 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.78■□□□□ 0.28
Cdc40Q9DC48 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Cdc40Q9DC48 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdc40Q9DC48 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdc40Q9DC48 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdc40Q9DC48 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdc40Q9DC48 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdc40Q9DC48 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdc40Q9DC48 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdc40Q9DC48 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdc40Q9DC48 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdc40Q9DC48 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdc40Q9DC48 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdc40Q9DC48 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdc40Q9DC48 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdc40Q9DC48 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdc40Q9DC48 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Cdc40Q9DC48 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cdc40Q9DC48 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Gm10812-201ENSMUST00000099864 546 ntBASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdc40Q9DC48 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cdc40Q9DC48 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdc40Q9DC48 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdc40Q9DC48 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cdc40Q9DC48 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdc40Q9DC48 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.75■□□□□ 0.27
Cdc40Q9DC48 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdc40Q9DC48 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.75■□□□□ 0.27
Cdc40Q9DC48 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdc40Q9DC48 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdc40Q9DC48 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdc40Q9DC48 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdc40Q9DC48 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdc40Q9DC48 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdc40Q9DC48 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdc40Q9DC48 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.74■□□□□ 0.27
Cdc40Q9DC48 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cdc40Q9DC48 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cdc40Q9DC48 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdc40Q9DC48 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdc40Q9DC48 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdc40Q9DC48 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdc40Q9DC48 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cdc40Q9DC48 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdc40Q9DC48 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
Cdc40Q9DC48 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cdc40Q9DC48 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdc40Q9DC48 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdc40Q9DC48 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Gm27275-201ENSMUST00000184318 272 ntBASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdc40Q9DC48 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdc40Q9DC48 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdc40Q9DC48 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdc40Q9DC48 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdc40Q9DC48 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdc40Q9DC48 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdc40Q9DC48 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdc40Q9DC48 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.72■□□□□ 0.27
Cdc40Q9DC48 Gm12896-201ENSMUST00000118430 226 ntBASIC16.72■□□□□ 0.27
Cdc40Q9DC48 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.72■□□□□ 0.27
Cdc40Q9DC48 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms