Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lysmd3Q99LE3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lysmd3Q99LE3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lysmd3Q99LE3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lysmd3Q99LE3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.72■□□□□ 0.59
Lysmd3Q99LE3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lysmd3Q99LE3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.72■□□□□ 0.59
Lysmd3Q99LE3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lysmd3Q99LE3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lysmd3Q99LE3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.72■□□□□ 0.59
Lysmd3Q99LE3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lysmd3Q99LE3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lysmd3Q99LE3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.72■□□□□ 0.59
Lysmd3Q99LE3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lysmd3Q99LE3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd3Q99LE3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Lysmd3Q99LE3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd3Q99LE3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd3Q99LE3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Lysmd3Q99LE3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd3Q99LE3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd3Q99LE3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd3Q99LE3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd3Q99LE3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Lysmd3Q99LE3 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.7■□□□□ 0.58
Lysmd3Q99LE3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd3Q99LE3 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.7■□□□□ 0.58
Lysmd3Q99LE3 Gm15378-201ENSMUST00000121894 207 ntBASIC18.7■□□□□ 0.58
Lysmd3Q99LE3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.7■□□□□ 0.58
Lysmd3Q99LE3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Lysmd3Q99LE3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd3Q99LE3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd3Q99LE3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd3Q99LE3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd3Q99LE3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Lysmd3Q99LE3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd3Q99LE3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd3Q99LE3 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.69■□□□□ 0.58
Lysmd3Q99LE3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.69■□□□□ 0.58
Lysmd3Q99LE3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd3Q99LE3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.69■□□□□ 0.58
Lysmd3Q99LE3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Lysmd3Q99LE3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.69■□□□□ 0.58
Lysmd3Q99LE3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd3Q99LE3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd3Q99LE3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd3Q99LE3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.69■□□□□ 0.58
Lysmd3Q99LE3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd3Q99LE3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd3Q99LE3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd3Q99LE3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lysmd3Q99LE3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lysmd3Q99LE3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lysmd3Q99LE3 Gm10138-203ENSMUST00000206952 366 ntBASIC18.68■□□□□ 0.58
Lysmd3Q99LE3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Lysmd3Q99LE3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lysmd3Q99LE3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lysmd3Q99LE3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Lysmd3Q99LE3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lysmd3Q99LE3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lysmd3Q99LE3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lysmd3Q99LE3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lysmd3Q99LE3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lysmd3Q99LE3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Lysmd3Q99LE3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lysmd3Q99LE3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lysmd3Q99LE3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lysmd3Q99LE3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lysmd3Q99LE3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lysmd3Q99LE3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Lysmd3Q99LE3 Gm10252-201ENSMUST00000209541 832 ntBASIC18.67■□□□□ 0.58
Lysmd3Q99LE3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lysmd3Q99LE3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lysmd3Q99LE3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lysmd3Q99LE3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Lysmd3Q99LE3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lysmd3Q99LE3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.67■□□□□ 0.58
Lysmd3Q99LE3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lysmd3Q99LE3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lysmd3Q99LE3 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.65■□□□□ 0.58
Lysmd3Q99LE3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lysmd3Q99LE3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Lysmd3Q99LE3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms