Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga11Q91XY8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga11Q91XY8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga11Q91XY8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga11Q91XY8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga11Q91XY8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga11Q91XY8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga11Q91XY8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga11Q91XY8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga11Q91XY8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga11Q91XY8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga11Q91XY8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga11Q91XY8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.43■□□□□ 0.38
Pcdhga11Q91XY8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga11Q91XY8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga11Q91XY8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga11Q91XY8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhga11Q91XY8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga11Q91XY8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga11Q91XY8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhga11Q91XY8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.42■□□□□ 0.38
Pcdhga11Q91XY8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga11Q91XY8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga11Q91XY8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga11Q91XY8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga11Q91XY8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga11Q91XY8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga11Q91XY8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhga11Q91XY8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhga11Q91XY8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Pcdhga11Q91XY8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga11Q91XY8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga11Q91XY8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Pcdhga11Q91XY8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.41■□□□□ 0.38
Pcdhga11Q91XY8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga11Q91XY8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga11Q91XY8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhga11Q91XY8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhga11Q91XY8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga11Q91XY8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.41■□□□□ 0.38
Pcdhga11Q91XY8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga11Q91XY8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhga11Q91XY8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga11Q91XY8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga11Q91XY8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga11Q91XY8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga11Q91XY8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.4■□□□□ 0.38
Pcdhga11Q91XY8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga11Q91XY8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga11Q91XY8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga11Q91XY8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga11Q91XY8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga11Q91XY8 Gm7514-201ENSMUST00000209475 934 ntBASIC17.4■□□□□ 0.38
Pcdhga11Q91XY8 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.4■□□□□ 0.38
Pcdhga11Q91XY8 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.4■□□□□ 0.38
Pcdhga11Q91XY8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga11Q91XY8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga11Q91XY8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Gm6420-201ENSMUST00000193885 723 ntBASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga11Q91XY8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Gm22325-201ENSMUST00000158904 308 ntBASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga11Q91XY8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms