Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.35■□□□□ 0.21
Cuedc1Q8R3V6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cuedc1Q8R3V6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cuedc1Q8R3V6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cuedc1Q8R3V6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cuedc1Q8R3V6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cuedc1Q8R3V6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cuedc1Q8R3V6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cuedc1Q8R3V6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cuedc1Q8R3V6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Cuedc1Q8R3V6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cuedc1Q8R3V6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cuedc1Q8R3V6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cuedc1Q8R3V6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cuedc1Q8R3V6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cuedc1Q8R3V6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.33■□□□□ 0.2
Cuedc1Q8R3V6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.33■□□□□ 0.2
Cuedc1Q8R3V6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cuedc1Q8R3V6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cuedc1Q8R3V6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cuedc1Q8R3V6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cuedc1Q8R3V6 Gm9987-201ENSMUST00000069768 567 ntBASIC16.33■□□□□ 0.2
Cuedc1Q8R3V6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cuedc1Q8R3V6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cuedc1Q8R3V6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cuedc1Q8R3V6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cuedc1Q8R3V6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cuedc1Q8R3V6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cuedc1Q8R3V6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cuedc1Q8R3V6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Cuedc1Q8R3V6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Cuedc1Q8R3V6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cuedc1Q8R3V6 Gm13158-201ENSMUST00000122007 736 ntBASIC16.32■□□□□ 0.2
Cuedc1Q8R3V6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cuedc1Q8R3V6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cuedc1Q8R3V6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.32■□□□□ 0.2
Cuedc1Q8R3V6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cuedc1Q8R3V6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cuedc1Q8R3V6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cuedc1Q8R3V6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cuedc1Q8R3V6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cuedc1Q8R3V6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cuedc1Q8R3V6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cuedc1Q8R3V6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cuedc1Q8R3V6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cuedc1Q8R3V6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cuedc1Q8R3V6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cuedc1Q8R3V6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cuedc1Q8R3V6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cuedc1Q8R3V6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cuedc1Q8R3V6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cuedc1Q8R3V6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cuedc1Q8R3V6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cuedc1Q8R3V6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cuedc1Q8R3V6 Gm2399-201ENSMUST00000104944 225 ntBASIC16.3■□□□□ 0.2
Cuedc1Q8R3V6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms