Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Nucks1Q80XU3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.33■□□□□ 0.68
Nucks1Q80XU3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Nucks1Q80XU3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nucks1Q80XU3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nucks1Q80XU3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Nucks1Q80XU3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Nucks1Q80XU3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Nucks1Q80XU3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nucks1Q80XU3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nucks1Q80XU3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nucks1Q80XU3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nucks1Q80XU3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Gm22325-201ENSMUST00000158904 308 ntBASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Gm5874-201ENSMUST00000096101 508 ntBASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nucks1Q80XU3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nucks1Q80XU3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nucks1Q80XU3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
Nucks1Q80XU3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nucks1Q80XU3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nucks1Q80XU3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nucks1Q80XU3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nucks1Q80XU3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
Nucks1Q80XU3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nucks1Q80XU3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nucks1Q80XU3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.31■□□□□ 0.68
Nucks1Q80XU3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nucks1Q80XU3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nucks1Q80XU3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nucks1Q80XU3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Nucks1Q80XU3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nucks1Q80XU3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nucks1Q80XU3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nucks1Q80XU3 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.3■□□□□ 0.68
Nucks1Q80XU3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nucks1Q80XU3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nucks1Q80XU3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nucks1Q80XU3 Gm42642-201ENSMUST00000200683 355 ntBASIC19.3■□□□□ 0.68
Nucks1Q80XU3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nucks1Q80XU3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nucks1Q80XU3 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.3■□□□□ 0.68
Nucks1Q80XU3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nucks1Q80XU3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nucks1Q80XU3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nucks1Q80XU3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nucks1Q80XU3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.29■□□□□ 0.68
Nucks1Q80XU3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nucks1Q80XU3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nucks1Q80XU3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nucks1Q80XU3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nucks1Q80XU3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nucks1Q80XU3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nucks1Q80XU3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.29■□□□□ 0.68
Nucks1Q80XU3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nucks1Q80XU3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nucks1Q80XU3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nucks1Q80XU3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nucks1Q80XU3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms