Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.66■□□□□ 0.74
Sh3tc2Q80VA5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3tc2Q80VA5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.66■□□□□ 0.74
Sh3tc2Q80VA5 Gm43183-201ENSMUST00000200632 547 ntBASIC19.66■□□□□ 0.74
Sh3tc2Q80VA5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sh3tc2Q80VA5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Sh3tc2Q80VA5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3tc2Q80VA5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3tc2Q80VA5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3tc2Q80VA5 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.65■□□□□ 0.74
Sh3tc2Q80VA5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sh3tc2Q80VA5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Sh3tc2Q80VA5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3tc2Q80VA5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3tc2Q80VA5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.64■□□□□ 0.73
Sh3tc2Q80VA5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Sh3tc2Q80VA5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3tc2Q80VA5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Sh3tc2Q80VA5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3tc2Q80VA5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3tc2Q80VA5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3tc2Q80VA5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.64■□□□□ 0.73
Sh3tc2Q80VA5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3tc2Q80VA5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3tc2Q80VA5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.61■□□□□ 0.73
Sh3tc2Q80VA5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Sh3tc2Q80VA5 Gm21814-202ENSMUST00000203277 873 ntBASIC19.61■□□□□ 0.73
Sh3tc2Q80VA5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.61■□□□□ 0.73
Sh3tc2Q80VA5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3tc2Q80VA5 Gm7367-201ENSMUST00000057611 492 ntBASIC19.61■□□□□ 0.73
Sh3tc2Q80VA5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Sh3tc2Q80VA5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3tc2Q80VA5 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.61■□□□□ 0.73
Sh3tc2Q80VA5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.61■□□□□ 0.73
Sh3tc2Q80VA5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3tc2Q80VA5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3tc2Q80VA5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3tc2Q80VA5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3tc2Q80VA5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms