Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Foxc1Q61572 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Foxc1Q61572 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Foxc1Q61572 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Foxc1Q61572 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxc1Q61572 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.22□□□□□ -0.29
Foxc1Q61572 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Foxc1Q61572 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxc1Q61572 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxc1Q61572 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxc1Q61572 Gm10653-202ENSMUST00000139570 835 ntBASIC13.22□□□□□ -0.29
Foxc1Q61572 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxc1Q61572 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxc1Q61572 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.22□□□□□ -0.29
Foxc1Q61572 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Foxc1Q61572 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxc1Q61572 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxc1Q61572 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Foxc1Q61572 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxc1Q61572 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxc1Q61572 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxc1Q61572 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Foxc1Q61572 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Foxc1Q61572 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.21□□□□□ -0.29
Foxc1Q61572 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 Gm20760-201ENSMUST00000179197 648 ntBASIC13.21□□□□□ -0.29
Foxc1Q61572 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.21□□□□□ -0.29
Foxc1Q61572 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.21□□□□□ -0.29
Foxc1Q61572 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 Gm4968-201ENSMUST00000071458 858 ntBASIC13.21□□□□□ -0.29
Foxc1Q61572 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Foxc1Q61572 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Foxc1Q61572 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Foxc1Q61572 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Foxc1Q61572 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Foxc1Q61572 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Foxc1Q61572 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Foxc1Q61572 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Foxc1Q61572 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Foxc1Q61572 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Foxc1Q61572 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.2□□□□□ -0.3
Foxc1Q61572 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxc1Q61572 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxc1Q61572 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Foxc1Q61572 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxc1Q61572 Gm18688-201ENSMUST00000204695 1859 ntBASIC13.19□□□□□ -0.3
Foxc1Q61572 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxc1Q61572 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.19□□□□□ -0.3
Foxc1Q61572 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Foxc1Q61572 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxc1Q61572 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Foxc1Q61572 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Foxc1Q61572 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Foxc1Q61572 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.19□□□□□ -0.3
Foxc1Q61572 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Foxc1Q61572 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Foxc1Q61572 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.19□□□□□ -0.3
Foxc1Q61572 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxc1Q61572 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.19□□□□□ -0.3
Foxc1Q61572 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Foxc1Q61572 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Foxc1Q61572 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxc1Q61572 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms