Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnga4Q3UW12 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnga4Q3UW12 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnga4Q3UW12 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cnga4Q3UW12 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnga4Q3UW12 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cnga4Q3UW12 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnga4Q3UW12 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnga4Q3UW12 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnga4Q3UW12 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Rps24-207ENSMUST00000224568 714 ntBASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnga4Q3UW12 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Smad6-203ENSMUST00000179458 273 ntBASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cnga4Q3UW12 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cnga4Q3UW12 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cnga4Q3UW12 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cnga4Q3UW12 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cnga4Q3UW12 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cnga4Q3UW12 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cnga4Q3UW12 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cnga4Q3UW12 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cnga4Q3UW12 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cnga4Q3UW12 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.33■□□□□ 0.52
Cnga4Q3UW12 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cnga4Q3UW12 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cnga4Q3UW12 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cnga4Q3UW12 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cnga4Q3UW12 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cnga4Q3UW12 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cnga4Q3UW12 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cnga4Q3UW12 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cnga4Q3UW12 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cnga4Q3UW12 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cnga4Q3UW12 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cnga4Q3UW12 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cnga4Q3UW12 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cnga4Q3UW12 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cnga4Q3UW12 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.33■□□□□ 0.52
Cnga4Q3UW12 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cnga4Q3UW12 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cnga4Q3UW12 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cnga4Q3UW12 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cnga4Q3UW12 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cnga4Q3UW12 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cnga4Q3UW12 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.32■□□□□ 0.52
Cnga4Q3UW12 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.32■□□□□ 0.52
Cnga4Q3UW12 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.32■□□□□ 0.52
Cnga4Q3UW12 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cnga4Q3UW12 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cnga4Q3UW12 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cnga4Q3UW12 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cnga4Q3UW12 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.32■□□□□ 0.52
Cnga4Q3UW12 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cnga4Q3UW12 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms